CB322166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.275e-15 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 11 ICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPGEAVVVNF 373 + P KF++ +AN I +A++ E +HIID + QG QW L H LA RP +RITG S L G+RL++FA+S N+PFEF + ++ L + GEAVVV++ Sbjct: 127 VSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHW 242
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.275e-15 Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ PY KFA+ +AN I EA E + +H+IDF + QG QW LL ALA RP G P R+TGI ++ L VG +L++ + NV FE++ A + +++ L ++P E+VVVN F Sbjct: 292 YESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNS--DYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVF 417
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVE 325 ++ CPY KFA+ +AN I EA +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E Sbjct: 307 YESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLE 412
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVE 325 ++ CPY KFA+ +AN I EA +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E Sbjct: 311 YESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLE 416
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVE 325 ++ CPY KFA+ +AN I EA +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E Sbjct: 320 YESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLE 425
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.647e-15 Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 11 ICPYWKFAYMSANVVIGEAVE--NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPF 379 +CP+ K A + AN I N IHIIDF I+ G QW L+H LA R G S +RITGI+ Q G+ G+RL+++ N+PFE+ A ++ + L+++ GE V VN F Sbjct: 401 VCPFKKIAIIFANHSIMRLASSANAKTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYNAIAQKWESIKLEDLKLKEGEFVAVNSLF 525
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.647e-15 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQ-PGEAVVVNFPF 379 + CPY KFA+ +AN I EAV ++H+ID + QG QW L+ ALA RPGG P R+TG+ + + G+ +G +L++ A + V F+F T ++E + E +VVN F Sbjct: 232 YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNRE----GIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVF 354
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.291e-14 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAM-TACEVERQHLRVQPG-EAVVVNFPF 379 ++ CPY KFA+ +AN I E +H+ID + G QW L+ ALA RP G P R+TGI S + + VG +L + A++ V FEF+ A+ +++ + L ++PG E+V VN F Sbjct: 227 YESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLT------DIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVF 347
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.560e-14 Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVN 370 F++ P K +Y+ N I EA+E E ++H+ID ++ QW+ LL A RP G P +RITG+ H + L+ + RL E A ++PF+F + + LRV+ GEA+ V+ Sbjct: 138 FEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGV------HHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVS 253
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVER-QHLRVQPGEAVVVN 370 L + PY KF + +AN I EAV +E +H+ID+ I +G QW L+ +LA G P +RIT + + + + G+RL+ FAAS PF F + + E R L++ GEA+V N Sbjct: 212 LQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNG-PHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFN 334 The following BLAST results are available for this feature:
BLAST of CB322166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322166 ID=CB322166; Name=CB322166; organism=Citrus sinensis; type=EST; length=380bpback to top |