CB322168

Overview
NameCB322168
Unique NameCB322168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5242 contig Csv1_Contig5242:553..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.997e-12
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFG 179
            G+LS R ++D++ YA+ CFK FGDRVK+W TFN+P +    G+D G   P RCS  FG
Sbjct:  163 GILSPRFIEDYSAYAEVCFKNFGDRVKHWATFNQPNIEPIGGFDAGDRPPRRCSYPFG 220          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL1A_PHACH (Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.997e-12
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 3
Query:    9 LLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            L  +  ++DF +YA  CF++FGD V+NW+TFNEP V++ +GY NG FAPG  S
Sbjct:  138 LNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHVS 190          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.914e-12
Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 3
Query:   12 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            LS  + KDF   AD CFK FGDRVK+W+T NEP    +L Y +G F P RCS  +GN
Sbjct:  167 LSSEMQKDFGYLADICFKHFGDRVKHWITINEPNQHISLAYRSGLFPPARCSMPYGN 223          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.914e-12
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS+ ++KD+ D+A+ CF+ FGDRVK W TFNEP    + GY  G  A GRCS
Sbjct:  151 GFLSENIIKDYVDFAEVCFREFGDRVKFWATFNEPWTYCSQGYGTGIHALGRCS 204          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS ++V+DF D++  CF+ FGD+VK W T NEP V+   GYD G  A GRCSK
Sbjct:  164 GFLSPQIVEDFRDFSRVCFEEFGDKVKMWTTINEPYVITVAGYDTGNKAVGRCSK 218          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS R+++DF D+A F F  +GDRVK+W+T NEP   +  GY+ G  APGRCSK
Sbjct:  170 GFLSDRILEDFRDFAQFAFNKYGDRVKHWVTINEPYEFSRGGYETGEKAPGRCSK 224          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL31_ARATH (Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.676e-12
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 3
Query:   12 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            LS R++ DF +YA FCF+ FGD+V  W TFNEP V +  GYD G  A GRCSK
Sbjct:  169 LSPRIIDDFRNYARFCFQEFGDKVSMWTTFNEPYVYSVSGYDAGNKAMGRCSK 221          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL29_ARATH (Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.676e-12
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G L+ ++++DF ++A  CF+ FGD+VK W T NEP V++  GYD G  A GRCSK
Sbjct:  164 GFLNPQIIEDFRNFARVCFENFGDKVKMWTTINEPYVISVAGYDTGIKAVGRCSK 218          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL21_ORYSJ (Beta-glucosidase 21 OS=Oryza sativa subsp. japonica GN=BGLU21 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.676e-12
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            G +S ++V DF  YAD CF+ FGDRV +W T  EP  +A  GYD G   P RCS  FG+
Sbjct:  160 GWISPKIVDDFTAYADVCFREFGDRVVHWTTVLEPNAMAQAGYDMGILPPNRCSYPFGS 218          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.719e-12
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:   18 KRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            K +V+D+  +A  CF  FGD+VKNW+TFNEP+   +  Y  G FAPGRCS
Sbjct:  216 KSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFAPGRCS 265          
The following BLAST results are available for this feature:
BLAST of CB322168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
BGL33_ORYSJ2.997e-1251.72Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
BGL1A_PHACH2.997e-1252.83Beta-glucosidase 1A OS=Phanerochaete chrysosporium... [more]
BGL46_ARATH3.914e-1254.39Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGL... [more]
BGL29_ORYSJ3.914e-1253.70Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
BGL28_ARATH5.111e-1254.55Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGL... [more]
BGL25_ARATH5.111e-1254.55Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL31_ARATH6.676e-1258.49Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGL... [more]
BGL29_ARATH6.676e-1250.91Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGL... [more]
BGL21_ORYSJ6.676e-1250.85Beta-glucosidase 21 OS=Oryza sativa subsp. japonic... [more]
BGLC_MAIZE8.719e-1254.00Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]

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Properties
Property NameValue
Genbank descriptionEST0286 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB206 similar to beta-glucosidase (acc# AAM61427), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322168 ID=CB322168; Name=CB322168; organism=Citrus sinensis; type=EST; length=184bp
ACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGATTACGCT
GACTTTTGCTTCAAGACATTTGGAGACAGAGTAAAGAATTGGATGACATT
TAACGAACCAAGAGTGGTAGCTGCTCTTGGTTATGATAATGGTTTCTTTG
CTCCTGGGAGGTGTTCCAAAGCATTTGGAAATTG
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