CB322168

Overview
NameCB322168
Unique NameCB322168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5242 contig Csv1_Contig5242:553..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: MYR3_SINAL (Myrosinase MB3 OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G L +++++DF DYAD CFK FG +VKNW+T N+   V   GY  G  APGRCS
Sbjct:  174 GFLDRQIIQDFKDYADLCFKEFGGKVKNWITINQLYTVPTRGYALGTDAPGRCS 227          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGLS_TRIRP (Non-cyanogenic beta-glucosidase OS=Trifolium repens PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G L+  V+ DF DY D CFK FGDRV+ W T NEP V +  GY  G  APGRCS
Sbjct:  171 GFLNSGVINDFRDYTDLCFKEFGDRVRYWSTLNEPWVFSNSGYALGTNAPGRCS 224          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL16_ARATH (Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 31/57 (54.39%), Postives = 35/57 (61.40%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAF 176
            GLL    V DF DYA+ CF+ FGDRVK W T NEP  +   GY  G  APGRCS  +
Sbjct:  166 GLLGDEFVNDFRDYAELCFQKFGDRVKQWTTLNEPYTMVHEGYITGQKAPGRCSNFY 222          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS R+V+D+ +YA+  F+ FGDRVK W+T N+P  +A  GY NG + PGRC+
Sbjct:  178 GFLSTRIVEDYTNYAELLFQRFGDRVKFWITLNQPLSLALKGYGNGSYPPGRCT 231          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL27_ARATH (Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGLU27 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS+  V DF D+A  CF+ FGDRVK W+T NEP V +  GYD G  APGR SK
Sbjct:  149 GFLSEEAVDDFKDFAALCFEEFGDRVKLWVTLNEPWVYSIGGYDTGRKAPGRASK 203          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL37_ARATH (Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G L + ++ DF DYAD CF+ FGDRVK+W+T N+   V   GY  G  APGRCS+
Sbjct:  184 GFLDRTIIDDFKDYADLCFERFGDRVKHWITINQLFTVPTRGYALGTDAPGRCSQ 238          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL32_ARATH (Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 3
Query:   12 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            LS R++ DF ++A FCF+ FGD+V  W TFNEP V +  GYD G  A GRCSK
Sbjct:  169 LSPRIIDDFRNFARFCFQEFGDKVSMWTTFNEPYVYSVSGYDAGNKAIGRCSK 221          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL1B_PHACH (Beta-glucosidase 1B OS=Phanerochaete chrysosporium GN=BGL1B PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 3
Query:    3 IGLLSK-RVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            +G L+K  +V+D+  YA  CF+ FGDRVK+W+T NEP  ++ LGY  G FAPGR S
Sbjct:  140 LGWLNKDEIVQDYVRYAGVCFERFGDRVKHWLTMNEPWCISILGYGRGVFAPGRSS 195          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: MYRO_BRANA (Myrosinase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.327e-11
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G L +++++DF DYAD CFK FG +VK+W+T N+   V   GY  G  APGRCS
Sbjct:  174 GFLDRQIIQDFKDYADLCFKEFGGKVKHWITINQLYTVPTRGYAIGTDAPGRCS 227          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.327e-11
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 3
Query:   30 KDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            KD+AD+A+ CF  FGDRVK W TFNEP   +A GY  G FA GRC+
Sbjct:  176 KDYADFAEVCFHEFGDRVKYWTTFNEPFTYSAYGYGGGVFASGRCA 221          
The following BLAST results are available for this feature:
BLAST of CB322168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
MYR3_SINAL1.139e-1153.70Myrosinase MB3 OS=Sinapis alba PE=1 SV=1[more]
BGLS_TRIRP1.139e-1157.41Non-cyanogenic beta-glucosidase OS=Trifolium repen... [more]
BGL16_ARATH1.139e-1154.39Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGL... [more]
BGL35_ARATH1.487e-1151.85Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
BGL27_ARATH1.487e-1158.18Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGL... [more]
BGL37_ARATH2.537e-1152.73Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 ... [more]
BGL32_ARATH2.537e-1156.60Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGL... [more]
BGL1B_PHACH2.537e-1153.57Beta-glucosidase 1B OS=Phanerochaete chrysosporium... [more]
MYRO_BRANA4.327e-1151.85Myrosinase OS=Brassica napus PE=2 SV=1[more]
BGL35_ORYSJ4.327e-1160.87Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionEST0286 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB206 similar to beta-glucosidase (acc# AAM61427), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322168 ID=CB322168; Name=CB322168; organism=Citrus sinensis; type=EST; length=184bp
ACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGATTACGCT
GACTTTTGCTTCAAGACATTTGGAGACAGAGTAAAGAATTGGATGACATT
TAACGAACCAAGAGTGGTAGCTGCTCTTGGTTATGATAATGGTTTCTTTG
CTCCTGGGAGGTGTTCCAAAGCATTTGGAAATTG
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