CB322171

Overview
NameCB322171
Unique NameCB322171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length423
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.728e-45
Identity = 88/137 (64.23%), Postives = 111/137 (81.02%), Query Frame = 1
Query:   13 ENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            ++++FQ +ILERSGLG+ T L  A+  IPP P+M+ AR EA+ V+F A+++LF  T +KPKDI ILIVNCSLF+PTPSLSAM+IN YKLR NI SYNL GMGCSA LIS+D+A +LLQVHPNS A++IS E IT N+
Sbjct:  118 KSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMESARNEAQMVIFTAMEDLFKNTGLKPKDIDILIVNCSLFSPTPSLSAMIINKYKLRSNIKSYNLSGMGCSASLISVDVARDLLQVHPNSNAIIISTEIITPNY 254          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.288e-42
Identity = 81/133 (60.90%), Postives = 105/133 (78.95%), Query Frame = 1
Query:   16 NLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENIT 414
            +L F +KI ERSGLGD TY  E ++++PP  +   +R+E E V+ GA++ LF  T V P++IGIL+VN S+FNPTPSLSAMV+N +KLR NI S+NLGGMGCSAG+I+IDLA +LL VH N+YALV+S ENIT
Sbjct:  122 SLDFLRKIQERSGLGDETYSPEGLIHVPPRKTFAASREETEKVIIGALENLFENTKVNPREIGILVVNSSMFNPTPSLSAMVVNTFKLRSNIKSFNLGGMGCSAGVIAIDLAKDLLHVHKNTYALVVSTENIT 254          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.682e-42
Identity = 83/134 (61.94%), Postives = 102/134 (76.12%), Query Frame = 1
Query:   19 LQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN 420
            + FQ+KILERSGLG  TY+ E +   P    M  +RKE E V+FGA+D LF  T VKP DIGIL+VN S FNPTPSL++M++N YKLR NI S NLGGMGCSAG+I++D+A  LLQVH N+YA+V+S ENIT N
Sbjct:  113 VDFQEKILERSGLGQETYIPEGLQCFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLRDNIKSLNLGGMGCSAGVIAVDVAKGLLQVHRNTYAIVVSTENITQN 246          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.685e-40
Identity = 76/139 (54.68%), Postives = 105/139 (75.54%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN 420
            +TEE +QF  +IL RSGLGD TY    +L  PP PSM EAR E+E V+FGA++ LF KT ++P+++GI IVNCSLFNP PSLS+M++N YKL+ ++ +YNL G       IS+DLA NLL+ +PN+YA+++S EN+TL+
Sbjct:   91 YTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG-------ISVDLATNLLKANPNTYAVIVSTENMTLS 222          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.969e-39
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 1
Query:   19 LQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN 420
            + F +KILERSGLG  TY+ E +  +P   ++  +R E E V+ GA+D LF  T + P DIGIL+VN S FNPTPSLS++++N +KLR NI S NLGGMGCSAG+I+ID A +LLQVH N+YALV+S ENIT N
Sbjct:  121 MDFCEKILERSGLGQETYVPEGLQTLPLQQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQN 254          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.282e-38
Identity = 74/140 (52.86%), Postives = 100/140 (71.43%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            F E  ++ Q+K+L++SG+G+ +Y+   V       ++++ R+EA  V+FGAIDEL A T +  K I IL++NC + N TPSLSAMVINHYKLR N  SYNLGGMGCSAG+I+IDLA +LL  H  SYALV+S E ++  W
Sbjct:  119 FNETAIELQRKVLDQSGIGEESYMPRVVFKPGHRVNLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALVVSTEIVSFTW 258          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.093e-33
Identity = 64/139 (46.04%), Postives = 100/139 (71.94%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN 420
            F +E+L  Q+KILERSG+ D   +   V  IPPN S+  AR+E   ++F  + +LF+K  + PK I IL+ NCSLF P+PS+++M+IN + +R +I S++L GMGCSAG++S++L  +L+++H +S ALV+SME ++ N
Sbjct:   78 FDQESLDLQQKILERSGISDDASVPATVHEIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINKFGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAVSPN 216          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.830e-32
Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 1
Query:   10 EENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            +E++ FQ +ILERS L + T +  +++ IP   S+   + E    +F ++++L  K  + P+ I ILI NCSL +P+PSLSAMVIN + +R NI S+NL GMGC+AG++S++LAN+LLQ H  S AL++S E +  +W
Sbjct:   84 QESIDFQARILERSWLSNQTSIPRSLMEIPLKKSLSSVKIETMTTIFTSVEDLLRKNKLSPRSIDILITNCSLHSPSPSLSAMVINKFHMRSNIKSFNLSGMGCAAGILSVNLANDLLQAHRGSLALIVSTEALNTHW 221          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.905e-27
Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 1
Query:   13 ENLQFQKKILERSGLGDSTYLXEAVLN-IPPNPSMKEARKEAEAVMFGAIDELFAKT--SVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            E  +F  + +  SG+G+ TY    VL     +P++ +A  E + +MF  +D+LF KT  S+ P DI IL+VN SLF P+PSL++ VIN YK+R +I SYNL G+GCSA +ISID+   + +   N+ ALV+S E +  +W
Sbjct:   67 EEYRFLLRTMASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDILVVNVSLFAPSPSLTSRVINRYKMREDIKSYNLSGLGCSASVISIDIVQRMFETRENALALVVSTETMGPHW 206          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 1
Query:   22 QFQKKILERSGLGDSTYLXEAVLN-IPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            +F  K +  SG+G+ TY    V       PS+++   E E     +I +L  +  + PKDI IL+VN S+ + TPSL++ +INHYK+R ++  +NL GMGCSA LIS+D+  N+ + + N  ALV + E+++ NW
Sbjct:   68 KFLLKAIVSSGIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSMLSSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESLSPNW 202          
The following BLAST results are available for this feature:
BLAST of CB322171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS5_ARATH4.728e-4564.233-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]
KCS18_ARATH1.288e-4260.903-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS8_ARATH1.682e-4261.943-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS14_ARATH2.685e-4054.68Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS16_ARATH2.969e-3958.213-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS15_ARATH3.282e-3852.863-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]
KCS7_ARATH1.093e-3346.043-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]
KCS20_ARATH7.830e-3244.93Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS21_ARATH9.905e-2743.573-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana... [more]
KCS12_ARATH4.601e-2439.263-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionEST0289 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB211 similar to beta-ketoacyl-CoA synthase (acc# AAO41904), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322171 ID=CB322171; Name=CB322171; organism=Citrus sinensis; type=EST; length=423bp
ACATTTACAGAGGAAAATCTTCAGTTTCAGAAGAAGATCCTAGAGCGATC
TGGACTTGGTGATTCAACTTACCTTNCAGAGGCTGTGCTCAACATTCCTC
CAAACCCATCAATGAAAGAAGCTAGAAAAGAAGCTGAGGCTGTGATGTTT
GGTGCCATTGATGAGCTTTTTGCAAAAACCTCTGTGAAACCCAAGGACAT
TGGTATCTTGATTGTGAATTGTAGCTTGTTCAATCCAACGCCATCTCTGT
CTGCCATGGTCATCAACCATTACAAGCTTCGAGGGAATATAATTAGCTAC
AATTTGGGAGGGATGGGCTGCAGTGCAGGTTTGATTTCAATTGATCTTGC
AAACAATCTTCTTCAGGTTCATCCCAACTCTTATGCATTGGTTATTAGCA
TGGAGAACATCACATTGAATTGG
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