CB322179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_TRIEI (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) GN=dapF PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.982e-23 Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V ++LA+IGPKFEH+ VFP RTNTEF+++ISP +KMRVWER VL + ER TV+LPGG L+IEW D +YMTGPAE VF G + Sbjct: 172 VTAIDLAKIGPKFEHNPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLTQNNERLVTVELPGGCLEIEWSTIDQKIYMTGPAEKVFTGII 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_NOSP7 (Diaminopimelate epimerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.895e-23 Identity = 53/106 (50.00%), Postives = 61/106 (57.55%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V + L IGPKFEHH FP R NTEF++++ LKMRVWER VL G +R TV+LPGGPL IEW E D VYMTGPAE VF G + Sbjct: 174 VAAIELESIGPKFEHHPAFPQRINTEFIQVVRRDYLKMRVWERGAGITLACGTGACASLVAGVLTGKCDRTATVELPGGPLQIEWSEIDQRVYMTGPAERVFTGKL 279
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_CLOTH (Diaminopimelate epimerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dapF PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.677e-23 Identity = 57/109 (52.29%), Postives = 64/109 (58.72%), Query Frame = -3 Query: 76 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLLN 402 VD L +IGPK EHH +FP R N EFVE+I + LKMRVWER VL G +ER+ TV L GG L IEW E +NHVYMTGPA VF G V LN Sbjct: 170 VDIFPLEKIGPKMEHHPLFPKRINAEFVEVIDRTTLKMRVWERGAGETLACGTGACAVLVASVLNGVSERKATVKLLGGDLIIEWNENNNHVYMTGPAVKVFEGEVDLN 278
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJB (Diaminopimelate epimerase OS=Synechococcus sp. GN=dapF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.525e-22 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = -3 Query: 88 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGS 402 +++L+LA +GP FEHH FP RTNTEFV+++SP++L++RVWER VLE AE + TV+LPGG L+I W HV+MTGPA VF G+ Sbjct: 178 LEELDLAAVGPLFEHHPAFPERTNTEFVQVLSPTRLRLRVWERGAGATLACGTGACAVLVAAVLEERAESQATVELPGGNLEIRWDPSTQHVWMTGPALHVFSGT 282
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_HELMI (Diaminopimelate epimerase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dapF PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.297e-22 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = -3 Query: 79 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 402 +D+ + +GPK E H FPA+TN EFV++++P +++MRVWER VL G+ +R+ TV L GGPL IEW+EE+N VYMTGPA VF G + L Sbjct: 174 IDEAPVTTLGPKVEVHPAFPAKTNVEFVQVVAPDEVQMRVWERGAGPTLACGTGACATVVGSVLNGYTDRKVTVHLAGGPLHIEWREENNRVYMTGPAVEVFRGELPL 281
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP8 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 8801) GN=dapF PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.297e-22 Identity = 49/101 (48.51%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 91 LNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 393 ++L +GP+FEHH FP RTNTEF+E++ +KMRVWER VL +R C V+LPGG L IEW E DN +YMTGPAE+VF G Sbjct: 177 IDLPTLGPQFEHHPGFPERTNTEFIEVVRRDYVKMRVWERGAGITLACGTGACASVVAGVLTNQCDRYCIVELPGGNLTIEWSEMDNRIYMTGPAELVFTG 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_METM7 (Diaminopimelate epimerase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=dapF PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21 Identity = 51/106 (48.11%), Postives = 61/106 (57.55%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V + L +IGP FE H FP +TN EFVE+I S +KMRVWER VL+G+ R+ TV L GG L IEW E DNH+YMTGPA VF G + Sbjct: 170 VSEFPLEKIGPLFEFHEKFPRKTNVEFVELIDDSTIKMRVWERGAGETLACGTGACAVLVASVLKGYVGRKATVKLLGGDLTIEWNESDNHIYMTGPATTVFEGEI 275
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_DESDA (Diaminopimelate epimerase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dapF PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21 Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 +D L+L IGP+FEHH +FP RTNTEF E+IS ++++MRVWER VL G+A R V+L GG L I W E NHVYMTG A VF G Sbjct: 180 IDDLDLPRIGPRFEHHPLFPKRTNTEFAEVISSTKVRMRVWERGAGETLACGTGACAVAVACVLNGYAGRDVEVELKGGSLHIHWDEASNHVYMTGGAVTVFSG 283
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_METM6 (Diaminopimelate epimerase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=dapF PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.636e-21 Identity = 51/106 (48.11%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V++ L +IGP FE H FP +TN EFVE+I S +KMRVWER VL+G+ R+ TV L GG L IEW E DNH+YMTGPA VF G + Sbjct: 170 VEEFPLEKIGPLFEIHEKFPRKTNVEFVELIDDSTVKMRVWERGAGETLACGTGACAVLVASVLKGYVGRKATVKLLGGDLTIEWNESDNHIYMTGPATTVFEGEI 275
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_METM5 (Diaminopimelate epimerase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=dapF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.137e-21 Identity = 51/106 (48.11%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V++ L +IGP FE H FP +TN EFVE+I S +KMRVWER VL+G+ R+ TV L GG L IEW E+DNH+YMTGPA VF G + Sbjct: 170 VEEFPLEKIGPLFEVHEKFPKKTNVEFVELIDDSTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRKATVKLLGGDLIIEWNEKDNHIYMTGPATTVFEGEI 275 The following BLAST results are available for this feature:
BLAST of CB322179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322179 ID=CB322179; Name=CB322179; organism=Citrus sinensis; type=EST; length=425bpback to top |