CB322179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_LEPBL (Diaminopimelate epimerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dapF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11 Identity = 36/105 (34.29%), Postives = 48/105 (45.71%), Query Frame = -3 Query: 85 DKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 399 D+ + IGP E H +FP R N EFV + R WER L G + + +DL GG L I+W+E N V MTGPA+ +F G + Sbjct: 176 DQFPVTGIGPLIERHPIFPKRINVEFVTVRGKDHFYQRTWERGAGETLACGTGACAVTVAGNLTGKSGKEVKIDLRGGTLRIQWQESGN-VLMTGPAKEIFSGEI 279
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_LEPBJ (Diaminopimelate epimerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dapF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11 Identity = 36/105 (34.29%), Postives = 48/105 (45.71%), Query Frame = -3 Query: 85 DKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 399 D+ + IGP E H +FP R N EFV + R WER L G + + +DL GG L I+W+E N V MTGPA+ +F G + Sbjct: 176 DQFPVTGIGPLIERHPIFPKRINVEFVTVRGKDHFYQRTWERGAGETLACGTGACAVTVAGNLTGKSGKEVKIDLRGGTLRIQWQESGN-VLMTGPAKEIFSGEI 279
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_BRASB (Diaminopimelate epimerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dapF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11 Identity = 36/104 (34.62%), Postives = 45/104 (43.27%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 V+ +L GP E+H +FP R N I+ + MR WER A R + LPGG L IEW+E D+HV MTG A F G Sbjct: 175 VNSYDLERFGPLLENHPIFPERANITLAHIVDRDHITMRTWERGAGLTKACGSAACATAVAAARLKRANRIVQMTLPGGELTIEWRERDDHVLMTGTATFEFEG 278
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ACTPJ (Diaminopimelate epimerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dapF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11 Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = -3 Query: 79 LKVDKLNLA---EIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 408 L+V+ +NL E+GP E+H FP R N F+++++ + +K+RV+ER +++G + VDL GG L IEW+ + +YMTG A ++ G + L Sbjct: 162 LQVEDINLTPVNELGPLLENHERFPERANIGFMQVVNRNHIKLRVFERGAGETQACGSGACGAVAVGIMQGVLDNNVQVDLSGGSLQIEWEGVGHPLYMTGDATHIYDGFIKL 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SHELP (Diaminopimelate epimerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V ++ IG H FP N F++++ + +K+RV+ER L+G RR VDLPGG L I W+ E ++MTGPAE V+ G + Sbjct: 172 VANADVERIGSLLTKHERFPKGVNVGFMQVVDANHIKLRVYERGAAETLACGSGACAAVAVGQLQGKLARRVRVDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQI 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_RHOPS (Diaminopimelate epimerase OS=Rhodopseudomonas palustris (strain BisB5) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 35/104 (33.65%), Postives = 45/104 (43.27%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 ++ +L GP E+H +FP R N I+ + MR WER A+R + LPGG L I W+E DNHV MTG A F G Sbjct: 174 IEAHDLGRFGPLLENHPIFPERANITLAHIVDRDHITMRTWERGAGLTRACGSAACATAVAAARLKRADRVVEMTLPGGQLSIAWRESDNHVLMTGGATFEFEG 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_PROMT (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain NATL2A) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 36/106 (33.96%), Postives = 48/106 (45.28%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 ++ + E G E H+ FP TN FVEII S +K++VWER G V LPGG L++EW + V+M GPA VF G + Sbjct: 177 IEGIPFQEWGSFLEKHNTFPNDTNVHFVEIIDKSNIKVKVWERGCGPTLACGTGACACLVVTSKLGKTLNNANVYLPGGKLEVEWPNQSGPVFMQGPALKVFSGEI 282
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_PROM1 (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain NATL1A) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 36/106 (33.96%), Postives = 48/106 (45.28%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 ++ + E G E H+ FP TN FVEII S +K++VWER G V LPGG L++EW + V+M GPA VF G + Sbjct: 177 IEGIPFQEWGSFLEKHNTFPNDTNVHFVEIIDKSNIKVKVWERGCGPTLACGTGACACLVVTSKLGKTLNNANVYLPGGKLEVEWPNQSGPVFMQGPALKVFSGEI 282
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_LEPIN (Diaminopimelate epimerase OS=Leptospira interrogans GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 37/105 (35.24%), Postives = 48/105 (45.71%), Query Frame = -3 Query: 85 DKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 399 D+ + IGP E HS+FP R N EFV I L R WER L + + +DL GG L I+W+E N + MTGPA +F G + Sbjct: 176 DEFPVRGIGPLIERHSIFPKRVNVEFVTIRGKDHLYQRTWERGAGETLACGTGACAVMVAGNLTRRSGKDVQIDLRGGTLRIQWQESGN-ILMTGPAREIFSGEI 279
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_AGRT5 (Diaminopimelate epimerase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11 Identity = 38/106 (35.85%), Postives = 51/106 (48.11%), Query Frame = -3 Query: 85 NLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGG----PLDIEWKEEDNHVYMTGPAEVVFYGSV 390 +L GP E+H +FP + N ++IS S L+ R WER G R+ T+D+ PL I+W+ EDNHV MTGPAE + GSV Sbjct: 178 DLERFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGRTGRKVTIDVASSPVRVPLTIDWR-EDNHVVMTGPAEWEWSGSV 282 The following BLAST results are available for this feature:
BLAST of CB322179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322179 ID=CB322179; Name=CB322179; organism=Citrus sinensis; type=EST; length=425bpback to top |