CB322181

Overview
NameCB322181
Unique NameCB322181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1447 contig Csv1_Contig1447:151..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322181 vs. ExPASy Swiss-Prot
Match: ADK_YEAST (Adenosine kinase OS=Saccharomyces cerevisiae GN=ADO1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.509e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   12 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAE----DKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKSKVFMMNLSAPFICEFFREPQENALP 626
            L+ +GNPLLD  A V  E+L KY +K N+AIL +    D  + ++DEL      + +AGGA QN+ + A ++L   G   Y G +GKDKF E +   +  AGV   Y       TG CA  + G  RSLV +L AAN +  +HL +   W +VE AK +YI GF LTVSP++I  + +HA   SK F++N SAPFI   F++     LP
Sbjct:    5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGGAAQNTARGAAYVLGA-GQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAALITGHNRSLVTDLGAANFFTPDHLDKH--WDLVEAAKLFYIGGFHLTVSPDAIVKLGQHAKENSKPFVLNFSAPFIPHVFKDALARVLP 210          
BLAST of CB322181 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.728e-23
Identity = 63/206 (30.58%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   12 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIW-SIVEKAKYYYIAGFFLTVSPESIQMVAEHA-AAKSKVFMMNLSAPFICEFFREPQENAL 623
            +  +GNP+LD+ A V   FL ++ +K  +A LA  + + +Y  L  + N   + GG+  NS++V Q +L+ PG+  Y+G IG D  G+ +K+     G+  ++       TG CAV +   ER+L  +L A   +     + PE W +    A  +Y   + LT +P++   VA +A    + +F +NLSAPF  E +++  ++ L
Sbjct:   15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSF-----RLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLL 214          
The following BLAST results are available for this feature:
BLAST of CB322181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADK_YEAST4.509e-3941.63Adenosine kinase OS=Saccharomyces cerevisiae GN=AD... [more]
ADK_TOXGO7.728e-2330.58Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0302 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB228 similar to adenosine kinase 2 (acc# AAG45247), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322181 ID=CB322181; Name=CB322181; organism=Citrus sinensis; type=EST; length=626bp
ACGAAGGGATCCTGTTGGGCATGGGAAACCCACTTCTTGACATTTCAGCG
GTTGTCGACGAAGAGTTCTTGAAAAAATATGACATCAAGTCGAACAATGC
TATTCTTGCTGAAGACAAGCACTTGCCCATGTATGATGAATTAGCTTCCA
AAGAAAATGTGGAGTATATTGCTGGGGGTGCTACACAAAATTCAATCAAA
GTTGCCCAGTGGATGCTCCAAATTCCTGGTGCTACTAGTTACATCGGCTG
CATTGGAAAGGATAAGTTTGGAGAGGAGATGAAGAAAAACTCAACAGCTG
CTGGTGTCAATGTAAAATACTACGAGGATGAATCTGCACCAACAGGGACA
TGTGCTGTTTGTGTTGTTGGTGGTGAGAGGTCACTTGTGGCCAACTTGTC
AGCTGCAAATTGTTACAAATCTGAGCACTTGAAGAGACCTGAAATATGGT
CAATAGTTGAAAAGGCAAAATATTACTACATTGCTGGGTTTTTCCTTACC
GTGTCTCCTGAGTCCATTCAAATGGTTGCTGAACACGCTGCTGCTAAGAG
CAAAGTCTTCATGATGAACCTTTCTGCTCCATTTATCTGCGAGTTCTTCA
GGGAACCACAGGAGAATGCATTACCG
back to top