CB322187

Overview
NameCB322187
Unique NameCB322187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29
Identity = 60/94 (63.83%), Postives = 73/94 (77.66%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            PEGLFP ILGHE AG VESVGEGVT+ +PGD VIP Y  +C ECKFCK+ KTNLC K+R   G G ++ D+ SRF+  GK ++HFMGTSTFS++
Sbjct:   59 PEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEY 151          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            PEGLFP +LGHE AGIVESVGEGVT  + GDHVI  Y  +C ECKFCKSGKTNLC K+R   GAGV M +  SR S  G+ ++HFMGTSTF+++
Sbjct:   60 PEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGV-MPEGTSRLSCKGQQLFHFMGTSTFAEY 152          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.879e-29
Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            PEGLFP +LGHE +GIVESVGEGVT   PGDHV+P Y  +C+EC++CK+ KTNLC K+R + G G  M D  SRF+ NGK ++HFMG STFS++
Sbjct:   60 PEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNG-FMPDGSSRFTCNGKQLFHFMGCSTFSEY 152          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.454e-29
Identity = 58/91 (63.74%), Postives = 73/91 (80.22%), Query Frame = 1
Query:   10 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC EC+ C S ++N+C  +R  T  G M++D +SRFSINGKPIYHF+GTSTFS++
Sbjct:   62 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEY 152          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_HETTR (Photosystem Q(B) protein OS=Heterocapsa triquetra GN=psbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.205e-29
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 1
Query:  379 WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            WG F  +I ST NRLYIGWFG+LM P L+ AT  +I AFI APPVDIDGIREPV+G+LLYGNNIISGA+IP+S AIG+HFY
Sbjct:   18 WGSFIGFILSTSNRLYIGWFGILMFPLLVLATVAYIAAFIFAPPVDIDGIREPVAGALLYGNNIISGAVIPSSNAIGVHFY 98          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            PEG FP +LGHE AGIVES+GEGV  V+PGDHVI  Y  EC+ECKFC+SGKTNLC K+R   G G +M D  SRFS   K + H+MG S+FSQ+
Sbjct:   59 PEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRG-LMPDGTSRFSCRDKTLLHYMGCSSFSQY 151          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.468e-29
Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 1
Query:   10 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            LFP I GHEA GIVESVGEGVT+++ GDHV+P +  EC++C  CKS ++N+C  +R  T  GVM++D KSRFSI GKPIYHF+GTSTFS++
Sbjct:   63 LFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEY 153          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.468e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            PEG+FP ILGHE AGIVES+GEGVT V+PGD VIP Y  +C ECKFC + KTNLC K+R   G GV M D  +RF+  GK ++HFMG STFS+F
Sbjct:   59 PEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGV-MPDGTTRFTCKGKEVFHFMGCSTFSEF 151          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.468e-29
Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 1
Query:   10 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++NLC  +R     GVM+ D +SRF+INGKPI+HF+GTSTFS++
Sbjct:   62 VFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEY 152          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.468e-29
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 1
Query:   10 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC+EC  CKS ++N+C  +R     GVM+ D KSRF+I GKPI+HF+GTSTFS++
Sbjct:   62 VFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEY 152          
The following BLAST results are available for this feature:
BLAST of CB322187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
ADHX_SPAAU1.439e-2963.83Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DROME1.439e-2964.89Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_CAEEL1.879e-2961.70Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1_ARATH2.454e-2963.74Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
PSBA_HETTR3.205e-2972.84Photosystem Q(B) protein OS=Heterocapsa triquetra ... [more]
FADH1_SCHPO4.186e-2962.77Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH_MALDO5.468e-2962.64Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADHX_OCTVU5.468e-2963.83Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH3_HORVU5.468e-2962.64Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_ORYSJ5.468e-2962.64Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionEST0309 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB267 similar to class III alcohol dehydrogenase(acc# AAB19117), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322187 ID=CB322187; Name=CB322187; organism=Citrus sinensis; type=EST; length=623bp
CCTGAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGT
GGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCA
TCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGGA
AAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCAT
GATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTATC
ACTTCATGGGAACCTCAACATTTAGCCAGTTTTTTGCAGAATTTGTATGC
TTGGGAGTCCCTGATGATTAAATAAACCAAGATTTTACCATGACTGCAAT
TTTAGAGAGACGCGAAAGCGAACGCCTATGGGGTCGCTTCTGTAACTGGA
TAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATG
ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGC
TGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTC
TACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA
GCTATAGGTTTGCATTTTTACCC
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