CB322187

Overview
NameCB322187
Unique NameCB322187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 1
Query:   46 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            I+ESVGEGVT+V PGDHV+P +  EC+EC  CKS ++N+C  +R  T  GVM+ D KSRFSINGKPIYHF+GTSTFS++
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEY 79          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 2.377e-24
Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 1
Query:    4 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG---ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            + LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R     T    +M DR SRF+  G+ IYHFMG S+FSQ+
Sbjct:   59 KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 154          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.105e-24
Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
Query:    4 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            + L P I GHEAAGIVES+GEGVTE + GDHV+  +  EC  C+ C SGK+N+C +V G    G+M +D+K+RFSI GKP+YH+   S+FS++
Sbjct:   63 QSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMC-QVLGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEY 154          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.012e-23
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query:    4 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG---ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            + LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C++CK C S  TNLCGK+R     T    +M DR SRF+   + IYHFMG S+FSQ+
Sbjct:   59 KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMGVSSFSQY 154          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.433e-23
Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = 1
Query:    4 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV---MMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            EGL P ILGHE AGIVESVG GV   +PGD VIP Y   CR+CKFC+S  TN C K        +   +M+D+ SRF+  GK IYHF+G S FSQ+
Sbjct:   60 EGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFTCKGKSIYHFLGISAFSQY 155          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P +LGHE AGIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC + +  T     + D  SRFS  GKPI+HF+ TSTFSQ+
Sbjct:   63 PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQY 151          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG+VESVGEGVT V+PGD VIP +  +C EC  C S K NLC K    + +G +M D  +RF+  GK I+HF+GTSTF+++
Sbjct:   62 FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSACLSTKGNLCSKNDIGSASG-LMPDGTTRFTCKGKAIHHFIGTSTFTEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.225e-22
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG+VESVGEGVT V+PGD VIP +  +C EC  C S K NLC K      A  +M D  SRF+  GK I+HF GTSTF+++
Sbjct:   61 FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRK-NDIGPASALMPDGTSRFTCKGKAIHHFAGTSTFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.225e-22
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC-----GKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++N C     GK +G      M+ D  SRF+  GKPI+HF+GTSTFSQ+
Sbjct:   63 PVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKG------MLLDGTSRFTCKGKPIHHFIGTSTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.906e-22
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF--SINGKPIYHFMGTSTFSQF 282
            +P ILGHEAAGIVESVGEGV E+  GDHV+P +  EC +C+ CK    NLC + R      VM+ D K+RF  S + KPIYHF+ TSTFS++
Sbjct:   64 YPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEY 155          
The following BLAST results are available for this feature:
BLAST of CB322187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
ADH1_ZEALU1.260e-2564.56Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH4_MOUSE2.377e-2456.25Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADHL6_ARATH3.105e-2453.76Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADH4_RAT2.012e-2355.21Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADHQ_RABIT3.433e-2355.21Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH1_RAT1.704e-2253.93Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1_APTAU1.704e-2256.67Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_STRCA2.225e-2257.78Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_RABIT2.225e-2255.32Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADHL4_ARATH2.906e-2255.43Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionEST0309 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB267 similar to class III alcohol dehydrogenase(acc# AAB19117), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322187 ID=CB322187; Name=CB322187; organism=Citrus sinensis; type=EST; length=623bp
CCTGAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGT
GGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCA
TCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGGA
AAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCAT
GATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTATC
ACTTCATGGGAACCTCAACATTTAGCCAGTTTTTTGCAGAATTTGTATGC
TTGGGAGTCCCTGATGATTAAATAAACCAAGATTTTACCATGACTGCAAT
TTTAGAGAGACGCGAAAGCGAACGCCTATGGGGTCGCTTCTGTAACTGGA
TAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATG
ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGC
TGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTC
TACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA
GCTATAGGTTTGCATTTTTACCC
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