CB322187

Overview
NameCB322187
Unique NameCB322187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NICTO (Photosystem Q(B) protein OS=Nicotiana tomentosiformis GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NICSY (Photosystem Q(B) protein OS=Nicotiana sylvestris GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NICPL (Photosystem Q(B) protein OS=Nicotiana plumbaginifolia GN=psbA PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NICDE (Photosystem Q(B) protein OS=Nicotiana debneyi GN=psbA PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NASOF (Photosystem Q(B) protein OS=Nasturtium officinale GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_NANDO (Photosystem Q(B) protein OS=Nandina domestica GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_MORIN (Photosystem Q(B) protein OS=Morus indica GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_MANES (Photosystem Q(B) protein OS=Manihot esculenta GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_LACSA (Photosystem Q(B) protein OS=Lactuca sativa GN=psbA PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
[Close]
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: PSBA_JASNU (Photosystem Q(B) protein OS=Jasminum nudiflorum GN=psbA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 
Query:  340 MTAILERRESERLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 621
            MTAILERRESE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY
Sbjct:    1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFY 94
The following BLAST results are available for this feature:
BLAST of CB322187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
PSBA_NICTO6.869e-4898.94Photosystem Q(B) protein OS=Nicotiana tomentosifor... [more]
PSBA_NICSY6.869e-4898.94Photosystem Q(B) protein OS=Nicotiana sylvestris G... [more]
PSBA_NICPL6.869e-4898.94Photosystem Q(B) protein OS=Nicotiana plumbaginifo... [more]
PSBA_NICDE6.869e-4898.94Photosystem Q(B) protein OS=Nicotiana debneyi GN=p... [more]
PSBA_NASOF6.869e-4898.94Photosystem Q(B) protein OS=Nasturtium officinale ... [more]
PSBA_NANDO6.869e-4898.94Photosystem Q(B) protein OS=Nandina domestica GN=p... [more]
PSBA_MORIN6.869e-4898.94Photosystem Q(B) protein OS=Morus indica GN=psbA P... [more]
PSBA_MANES6.869e-4898.94Photosystem Q(B) protein OS=Manihot esculenta GN=p... [more]
PSBA_LACSA6.869e-4898.94Photosystem Q(B) protein OS=Lactuca sativa GN=psbA... [more]
PSBA_JASNU6.869e-4898.94Photosystem Q(B) protein OS=Jasminum nudiflorum GN... [more]

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Properties
Property NameValue
Genbank descriptionEST0309 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB267 similar to class III alcohol dehydrogenase(acc# AAB19117), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322187 ID=CB322187; Name=CB322187; organism=Citrus sinensis; type=EST; length=623bp
CCTGAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGT
GGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCA
TCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGGA
AAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCAT
GATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTATC
ACTTCATGGGAACCTCAACATTTAGCCAGTTTTTTGCAGAATTTGTATGC
TTGGGAGTCCCTGATGATTAAATAAACCAAGATTTTACCATGACTGCAAT
TTTAGAGAGACGCGAAAGCGAACGCCTATGGGGTCGCTTCTGTAACTGGA
TAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATG
ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGC
TGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTC
TACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA
GCTATAGGTTTGCATTTTTACCC
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