CB322187

Overview
NameCB322187
Unique NameCB322187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.213e-21
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K       G  + D   RF+ +GKPI+HF+G STFSQ+
Sbjct:   63 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGT-LQDGTRRFTCSGKPIHHFVGVSTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.213e-21
Identity = 50/89 (56.18%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ + N C K   +   G  + D  SRF+  GKPI+HF+G STFSQ+
Sbjct:   63 PVILGHEAAGIVESVGEGVTTVEPGDKVIPLALPQCGKCRICKTPERNYCLKNDVSNPRGT-LQDGTSRFTCRGKPIHHFLGVSTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C  CK  + NLC  ++  +     M D  SRF+  GKPI+HF+GTSTFSQ+
Sbjct:   63 PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 1
Query:    4 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI---------NGKPIYHFMGTSTFSQF 282
            E  FP ILGHEA GIVESVGEGV +V+ GD+VIP +  EC ECK CK  ++NLC +        VM+ND  +RFS            +PIYHF+ TSTF+++
Sbjct:   62 ERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEY 163          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG+VESVGEGVT+ +PGD VIP +  +C EC+ CK+ ++NLC K       GV++ D+ SRF+  GK I++F+ TSTF+++
Sbjct:   62 FPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLL-DKTSRFTCKGKSIHNFISTSTFTEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G +TFS++
Sbjct:   63 PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G +TFS++
Sbjct:   63 PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCKHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G +TFS++
Sbjct:   63 PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P +LGHEAAG+VESVGEGVT V+PGD VIP +  +C +C+ C+S K NLC      +G+G +M D  SRF+  GK I+HF+ TSTF+++
Sbjct:   62 PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSG-LMPDGTSRFTCKGKSIHHFISTSTFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG++ESVGE VT ++PGD VIP +  +C EC+ C S K NLC K   ++    +M D  +RF+  GK I+HF+GTSTF+++
Sbjct:   62 FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEY 151          
The following BLAST results are available for this feature:
BLAST of CB322187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
ADH1G_HUMAN3.213e-2155.06Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1A_MACMU3.213e-2156.18Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1S_HORSE4.196e-2155.06Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADHL3_ARATH5.480e-2150.00Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADH1_RANPE5.480e-2153.33Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1_GEOKN7.157e-2152.81Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOBU7.157e-2152.81Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_GEOAT7.157e-2152.81Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_NAJNA9.348e-2153.93Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_CHICK9.348e-2152.22Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]

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Properties
Property NameValue
Genbank descriptionEST0309 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB267 similar to class III alcohol dehydrogenase(acc# AAB19117), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322187 ID=CB322187; Name=CB322187; organism=Citrus sinensis; type=EST; length=623bp
CCTGAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGT
GGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCA
TCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGGA
AAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCAT
GATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTATC
ACTTCATGGGAACCTCAACATTTAGCCAGTTTTTTGCAGAATTTGTATGC
TTGGGAGTCCCTGATGATTAAATAAACCAAGATTTTACCATGACTGCAAT
TTTAGAGAGACGCGAAAGCGAACGCCTATGGGGTCGCTTCTGTAACTGGA
TAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATG
ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGC
TGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTC
TACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA
GCTATAGGTTTGCATTTTTACCC
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