CB322187

Overview
NameCB322187
Unique NameCB322187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG+VESVGEGVT ++PGD VIP +  +C EC  C+  + N+C K       G ++ D  SRF+  GKP+YHF+ T TF+++
Sbjct:   61 FPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTG-LLYDGTSRFTYQGKPVYHFVRTGTFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K       G +M D  SRF+  GKPIY+ +GTSTF+++
Sbjct:   62 FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG-LMADMTSRFTCRGKPIYNLVGTSTFTEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP I+GHEA GIVESVGE VT V+PGD VIP +  +CREC  C++ + NLC +    TG GV+  D  +RF+  GKP+ HFM TSTF+++
Sbjct:   62 FPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIR-SDLTGRGVLA-DGTTRFTCKGKPVQHFMNTSTFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1
Query:   13 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            FP ILGHEAAG+VESVGE VT ++PGD VIP +  +C EC+ C S K NLC K   ++    +M D  +RF+  GK I+HF+GTSTF+++
Sbjct:   61 FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20
Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ ++N C K   +   G  + D  SRF+   KPI+HF+G STFSQ+
Sbjct:   63 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT-LQDGTSRFTCRRKPIHHFLGISTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.350e-19
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P +LGHE AGIVESVGEGVT V+PGD VIP +  +C +C+ CK  + NLC K       G ++ D  SRF+  GK I++F+ TSTFSQ+
Sbjct:   63 PAVLGHEGAGIVESVGEGVTSVKPGDKVIPLFTPQCGKCRICKHPEYNLCMKNDLMQPRGTLL-DGTSRFTCRGKAIHNFISTSTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P +LGHE AGIVESVGEGVT V+PGD VIP +  +C EC+ CK  ++N C +       G  + +  SRFS  GK I++F+ TSTFSQ+
Sbjct:   63 PAVLGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMPRGT-LREGTSRFSCKGKQIHNFISTSTFSQY 150          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.007e-19
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA-GVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P ILGHEAAG+VES GEGVT ++PGD VIP +  +C EC  C     NLC  +R   G+   +M D  SRF+  GK I+HF+GTSTF+++
Sbjct:   62 PMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLC--IRNDLGSPSGLMADGTSRFTCKGKDIHHFIGTSTFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.007e-19
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   16 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQF 282
            P +LGHEAAG+VESVGEGVT V+PGD VIP +  +C +C  C+S + NLC    +  ATG   +M D  SRF+  GK ++HF+ TS+F+++
Sbjct:   62 PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATG---LMPDGTSRFTCKGKSLHHFISTSSFTEY 149          
BLAST of CB322187 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.546e-18
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1
Query:    1 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMGTSTFSQF 282
            P   FP ILGHEA G+VESVGE V EV  GD V+P +  +C +C  CKS K+NLC K        +   D  SRF+ +NG+ ++HF+  S+FS++
Sbjct:   68 PPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEY 162          
The following BLAST results are available for this feature:
BLAST of CB322187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
ADH1B_UROHA9.348e-2151.11Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH8_RANPE1.221e-2052.22NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_RAT1.221e-2054.44Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH1_COTJA1.595e-2053.33Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1A_HUMAN3.552e-2055.06Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADH1_PERMA1.350e-1952.81Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_MOUSE2.302e-1951.69Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1_ALLMI3.007e-1952.22Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH1A_UROHA3.007e-1950.55Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADHL7_ARATH2.546e-1846.32Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionEST0309 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB267 similar to class III alcohol dehydrogenase(acc# AAB19117), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322187 ID=CB322187; Name=CB322187; organism=Citrus sinensis; type=EST; length=623bp
CCTGAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGT
GGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCA
TCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCTGGA
AAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCTGGTGTCAT
GATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCCTATCTATC
ACTTCATGGGAACCTCAACATTTAGCCAGTTTTTTGCAGAATTTGTATGC
TTGGGAGTCCCTGATGATTAAATAAACCAAGATTTTACCATGACTGCAAT
TTTAGAGAGACGCGAAAGCGAACGCCTATGGGGTCGCTTCTGTAACTGGA
TAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATG
ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGC
TGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTC
TACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA
GCTATAGGTTTGCATTTTTACCC
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