CB322190

Overview
NameCB322190
Unique NameCB322190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  232 KKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            +K YRGVR+RPWGKFAAEIRDS R G R+WLGTF+T            F ++G+ A+LNF
Sbjct:   79 EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNF 138          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  241 YRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            +RGVRRRPWGKFAAEIRD +R+G R+WLGTFET            F +RG  A+LNF
Sbjct:   20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNF 76          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12
Identity = 39/89 (43.82%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  145 ESTAQNISFMPQRSEVHTSSMLEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            ES    I    Q  +V  S   E      ++ YRGVR+RPWGKFAAEIRDS R+G R+WLGTF+             F  +G+ A LNF
Sbjct:   54 ESPEMMIKEEIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNF 142          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  199 SSMLEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGA-KALLNF 411
            S  L  + +   + YRGVR+RPWGKFAAEIRDS R+G R+WLGTF+T             R+RG  KA  NF
Sbjct:   96 SCSLSSRVSCKTRKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF 167          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  133 QVINESTAQNISFMPQRSEVHTSSMLEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            +VI   T   +     +S+ H     +P+R    +HYRGVR+RPWGK+AAEIRD  +   R+WLGTFET             + +G KA LNF
Sbjct:    7 RVIENPTDPPVKQELDKSDQHQPDQDQPRR----RHYRGVRQRPWGKWAAEIRD-PKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.201e-11
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  100 NENDSQDMVIYQVINESTAQNISFMPQRSEVHTSSM-LEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            +E+D  D V     +E T Q I   P   +  +SS+ L+ K    +++YRGVR+RPWGK+AAEIRD  +   R+WLGTF+T            F  RG KA LNF
Sbjct:   30 SESDVSDFV-----SELTGQPI---PSSIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.676e-11
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  226 ISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            + K+HYRGVR+RPWGK+AAEIRD  +   R+WLGTFET             + +G+KA LNF
Sbjct:   87 LRKRHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.676e-11
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1
Query:  169 FMPQRSEVHTSSMLEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            + PQ      +   + +  + ++HYRGVR+RPWGK+AAEIRD  +   R+WLGTFET             + +G+KA LNF
Sbjct:   66 YNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRD-PKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query:  160 NISFMPQRSEVHTSSMLEPKRTISKKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            ++S   +R  V  S   + KR   K  YRG+R+RPWGK+AAEIRD ++ G R+WLGTF+T             ++RG KA LNF
Sbjct:   24 SVSSRKKRKPVSVSEERDGKRE-RKNLYRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105          
BLAST of CB322190 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query:  232 KKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETXXXXXXXXXXXXFRMRGAKALLNF 411
            K  YRG+R+RPWGK+AAEIRD  R G RIWLGTF+T             R+RG+KA +NF
Sbjct:  122 KNQYRGIRQRPWGKWAAEIRD-PREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180          
The following BLAST results are available for this feature:
BLAST of CB322190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ERF94_ARATH2.859e-1356.67Ethylene-responsive transcription factor ERF094 OS... [more]
ERF98_ARATH4.877e-1359.65Ethylene-responsive transcription factor ERF098 OS... [more]
ERF93_ARATH1.419e-1243.82Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF91_ARATH7.043e-1250.00Ethylene-responsive transcription factor ERF091 OS... [more]
EF113_ARATH7.043e-1240.86Ethylene-responsive transcription factor ERF113 OS... [more]
EF112_ARATH1.201e-1141.90Ethylene-responsive transcription factor ERF112 OS... [more]
EF115_ARATH2.676e-1151.61Ethylene-responsive transcription factor ERF115 OS... [more]
EF114_ARATH2.676e-1140.74Ethylene-responsive transcription factor ERF114 OS... [more]
ERF71_ARATH4.565e-1144.05Ethylene-responsive transcription factor ERF071 OS... [more]
RA212_ARATH7.787e-1155.00Ethylene-responsive transcription factor RAP2-12 O... [more]

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Properties
Property NameValue
Genbank descriptionEST0312 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB271 similar to pathogenesis-related transcriptional activator PTI5 (acc# AAC49740), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322190 ID=CB322190; Name=CB322190; organism=Citrus sinensis; type=EST; length=587bp
CGAATCCTATAGAATCAGAGCGCGCGATACCCATAAAACCAAAAGAAATA
GCCGATCAAAGAAGCCATGTTTCCGGCCTCCCAAATTGAGCTACCATTTA
ATGAAAATGATTCACAAGACATGGTCATATACCAAGTCATAAATGAATCG
ACGGCCCAAAATATTTCATTCATGCCTCAAAGAAGCGAAGTTCACACATC
AAGCATGCTTGAACCGAAACGGACCATAAGCAAGAAGCACTACAGAGGCG
TGAGGCGTCGGCCATGGGGCAAATTCGCGGCTGAGATTCGAGACTCAGCC
AGACACGGCCAACGGATATGGCTGGGCACGTTTGAAACAGCAGAAGAGGC
TGCCCTGGCTTACGATAGAGCTGCTTTTCGGATGCGTGGTGCTAAGGCGT
TGCTTAATTTTCCGGCCGAAGTGGTTGCTGCTCCGTGTCCATCATCTTCG
CCATCGCTTGAAAAATCGAATGTAAAATTGAGCTCAATATTGGAGAACAA
TCCAGAGGTGAGTGGCAGTAGCTCTAGCACGGTTTCAACTGCGACTCAGA
GATCGGAATCGGAGTAATTAAGTAGTCAAAGTGCTAG
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