CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYKC_ENCCU (Probable lysyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU04_0580 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.565e-32 Identity = 72/153 (47.06%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDK--DPIEIDFTPPFRRIDMVEELEKIANLQIPKD-LASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE+++SGM++ + G+ I Y ++ + +E+ F PFR I ++EEL L + + L E + L AC K + P+T +R+LDKL+GH +E CVNP+F+ +HP MSPLAK HRSK GLTERFELFIN E+CNAYTELN+P Sbjct: 217 TEELISGMVENMFGTDTIVYSPKKREERTESVELSFKRPFRVISILEELNARLGLDLSGETLDREETLEKLLSACDKEGLSVEKPRTLSRVLDKLIGHVIEPQCVNPTFVKDHPIAMSPLAKNHRSKAGLTERFELFINCKEICNAYTELNNP 369
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYKC_ENTBH (Probable lysyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_25548 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 5.914e-29 Identity = 65/153 (42.48%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHS---NGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIP-KDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 E++LSG++K I GS K Y +D+ + +DF+ PF+RID++EEL K N+++ +++ E + L + +I P+T R+LD +G ++E C+NP+F+ P MSPLAK HRSK G+TERFE+F N E+ NAYTELN P Sbjct: 293 EELLSGLVKLIKGSSKFIYQPCKRETIDEIKVPLDFSTPFKRIDILEELNKSLNIELTGENIEKPETLELLIKKAEELNIIVNNPKTLNRMLDAFIGEYIEPQCINPTFVTGFPICMSPLAKDHRSKAGITERFEMFCNGKELVNAYTELNIP 445
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACV8 (Lysyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=lysS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.177e-23 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TEKM+ + ++ G+ ++K N IDF P++R+ M++ +++ DL + + + + C K +++ +L+D++ G F E T + P+FI ++P+ MSPL K HRS P LTERFEL +N E+CNAY+ELNDPI Sbjct: 293 TEKMIEKICLDVNGTTQVKVGDN-------IIDFKAPYKRVTMLDSIKEHTGY----DLTGMNEEQ-IREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPI 431
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THESQ (Lysyl-tRNA synthetase OS=Thermotoga sp. (strain RQ2) GN=lysS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.333e-23 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++ ++K G+ KI Y EIDFTPP++R+ M + L++ + I +D V K L + V+ +IK A L+DKL +EE VNP+FII+HP ++SPLAK HR P LTERFEL I E+ NA++ELNDP+ Sbjct: 281 TEELIVEVVKRTCGTLKISYQGK-------EIDFTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK-LEEYGVELEIK-----NRAHLIDKL-RDLVEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPV 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THEP1 (Lysyl-tRNA synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=lysS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.333e-23 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++ ++K G+ KI Y EIDFTPP++R+ M + L++ + I +D V K L + V+ +IK A L+DKL +EE VNP+FII+HP ++SPLAK HR P LTERFEL I E+ NA++ELNDP+ Sbjct: 281 TEELIVEVVKRTCGTLKISYQGK-------EIDFTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK-LEEYGVELEIK-----NRAHLIDKL-RDLVEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPV 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THEMA (Lysyl-tRNA synthetase OS=Thermotoga maritima GN=lysS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.333e-23 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++ ++K G+ KI Y EIDFTPP++R+ M + L++ + I +D V K L + V+ +IK A L+DKL +EE VNP+FII+HP ++SPLAK HR P LTERFEL I E+ NA++ELNDP+ Sbjct: 281 TEELIVEVVKRTCGTLKISYQGK-------EIDFTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK-LEEHGVELEIK-----NRAHLIDKL-RDLVEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPV 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_DEHE1 (Lysyl-tRNA synthetase OS=Dehalococcoides ethenogenes (strain 195) GN=lysS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.361e-22 Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E+M+S ++KEI+G Y + + LD FTPP+ R+ M + +++ A + D + LA ++ +K P + +L+D+LVG F+E + P+F+ +HP MSPLAK P LTERFE E+ NA++ELNDP+ Sbjct: 282 EEMVSSVVKEISGGYTVPFGDTTLD-------FTPPWPRLSMRDAVKQYAGI----DFFDFPTKEALAAEMIRRKLKVDPAKDWGKLVDELVGEFVEPRLIQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPV 420
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_DEHSC (Lysyl-tRNA synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=lysS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.145e-22 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E+M+S ++KEI+G Y + + I +DFTPP+ R+ M + +++ A + D + LA + +K P + +L+D+LVG F+E V P+F+ +HP MSPLAK P LTERFE E+ NA++ELNDP+ Sbjct: 282 EEMVSSVVKEISGGYTLPFGD-------ITLDFTPPWPRLTMRDAVKQYAGI----DFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPV 420
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_DEHSB (Lysyl-tRNA synthetase OS=Dehalococcoides sp. (strain BAV1) GN=lysS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.145e-22 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E+M+S ++KEI+G Y + + I +DFTPP+ R+ M + +++ A + D + LA + +K P + +L+D+LVG F+E V P+F+ +HP MSPLAK P LTERFE E+ NA++ELNDP+ Sbjct: 282 EEMVSSVVKEISGGYTLPFGD-------ITLDFTPPWPRLTMRDAVKQYAGI----DFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPV 420
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CHLP8 (Lysyl-tRNA synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lysS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.145e-22 Identity = 47/121 (38.84%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 EI+ PPFRR+ + + +++ ++I +D + + D ++ D P ++ +++D++ G F+E + P+FI ++PE MSPLAK HRS+PGL ERFEL + EVCN+++ELNDP+ Sbjct: 326 EINLKPPFRRLTIADSIKEYTGMEI-RDKSEAQLRDIAKDLGLELD----PKISSGKIIDEIFGEFVEPKLIQPTFITDYPEEMSPLAKKHRSEPGLVERFELIVGGKEVCNSFSELNDPV 441 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |