CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STAA8 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=lysS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.847e-14 Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M+ + E+ GS K++Y+ ID + R+ +V+ +++ + D V++++ + I+ +L++ +EET + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TESMVRHIANEVLGSAKVQYNGE-------TIDLESAWTRLHIVDAVKEATGV----DFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STAA3 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain USA300) GN=lysS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.847e-14 Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M+ + E+ GS K++Y+ ID + R+ +V+ +++ + D V++++ + I+ +L++ +EET + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TESMVRHIANEVLGSAKVQYNGE-------TIDLESAWTRLHIVDAVKEATGV----DFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STAA1 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lysS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.847e-14 Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M+ + E+ GS K++Y+ ID + R+ +V+ +++ + D V++++ + I+ +L++ +EET + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TESMVRHIANEVLGSAKVQYNGE-------TIDLESAWTRLHIVDAVKEATGV----DFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_LEUMM (Lysyl-tRNA synthetase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=lysS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.847e-14 Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE + ++ KI Y EID F R +V+ +++ + ++++ EA K D VK++ +++ F+E+T V P+F+ HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TEGIFKAAASVVSDDLKITYQGT-------EIDLGTKFARKHLVDLIKEQTGIDFWQEMSVEEAQKLADDNHVKYE----KYWGVGHIINAFFEEFVEDTLVQPTFVYGHPVEVSPLAKKNTDDPRFTDRFELFIMGSEYANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STRSY (Lysyl-tRNA synthetase OS=Streptococcus suis (strain 05ZYH33) GN=lysS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.412e-14 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE ++ K + G + Y EI PF+RI MV+ +++ + ++++ EA A+ V + ++++ ++E T + P+F+ HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 288 TEGIIQHTAKAVVGDGPVTYQGT-------EIAIHEPFKRIHMVDAIKEQTGVDFWQEMSFEEAKALAAEHKVPVE---KHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPI 428
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STRS2 (Lysyl-tRNA synthetase OS=Streptococcus suis (strain 98HAH33) GN=lysS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.412e-14 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE ++ K + G + Y EI PF+RI MV+ +++ + ++++ EA A+ V + ++++ ++E T + P+F+ HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 288 TEGIIQHTAKAVVGDGPVTYQGT-------EIAIHEPFKRIHMVDAIKEQTGVDFWQEMSFEEAKALAAEHKVPVE---KHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPI 428
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_MYCMO (Lysyl-tRNA synthetase OS=Mycoplasma mobile GN=lysS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.412e-14 Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 EID PFRR++MVE L + + + K S E K LA K IK ++++L F+E+ + P+F+ HP +SPLA ++ P T+R ELFI E N +TEL DPI Sbjct: 302 EIDLNKPFRRLNMVEALNEKLGIDLYK--ISFEDAKVLAK---KHHIKVESYFKIGHIINELFELFIEKDLIQPTFVYGHPIEISPLANKNKKNPNFTDRAELFIGTKEYANMFTELTDPI 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STAAW (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=lysS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M+ + E+ GS K++Y+ ID + R+ +V+ +++ + D V+++ + I+ +L++ +EET + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TESMVRHIANEVLGSAKVQYNGE-------TIDLESAWTRLHIVDAVKEATGV----DFYEVKSDDEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STAAS (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MSSA476) GN=lysS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M+ + E+ GS K++Y+ ID + R+ +V+ +++ + D V+++ + I+ +L++ +EET + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 286 TESMVRHIANEVLGSAKVQYNGE-------TIDLESAWTRLHIVDAVKEATGV----DFYEVKSDDEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_MYCHJ (Lysyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=lysS PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.115e-14 Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 +I+F F R DM+E K+ N DL S L + K +K P L++K F+E T +NP+FII HP +SPLAK + + P T R ELFI E N + ELNDPI Sbjct: 304 KINFLEKFARYDMIEITSKLMNF----DLKSANFAD-LVEKAKKEGVKIEPFFKKGHLINKFFEKFVEPTLINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPI 419 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |