CB322191

Overview
NameCB322191
Unique NameCB322191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length455
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACC7 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain AH187) GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKQVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKEHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACC4 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain B4264) GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TEDMVAHIAKKVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKQYSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACC1 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 10987) GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKQVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKEHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACC0 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain AH820) GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKQVLGTTTIQYGD-------YEINLEPKWTRLHMVDAIKEHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACAN (Lysyl-tRNA synthetase OS=Bacillus anthracis GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKQVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKEHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACAH (Lysyl-tRNA synthetase OS=Bacillus thuringiensis (strain Al Hakam) GN=lysS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.018e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKQVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKEHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SHEDO (Lysyl-tRNA synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=lysS PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.166e-14
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKI----ANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448
            TE+MLS +  ++ GS ++ Y  +        +DF  P+ R+ M+E ++K     A +Q       V+  +++ D      IK     T  +LL+++ G   E   + P+FI  +P  +SPLA+ + +   +T+RFE FI   EV N ++ELND
Sbjct:  283 TEEMLSSIAIDLLGSAQMPYGEH-------TVDFGGPYARLSMLEAIQKYNPENATIQA-MTYEQVKDVEFMRDLASSLGIKLEKFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELND 427          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_MYCS5 (Lysyl-tRNA synthetase OS=Mycoplasma synoviae (strain 53) GN=lysS PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 9.166e-14
Identity = 44/121 (36.36%), Postives = 65/121 (53.72%), Query Frame = 2
Query:   92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            EI+   PF+R+DM++E+ K   +    D  +V   K L +   +  +K     T   + ++L    +E+T V P+F++ HP  +SPL  Y  S P   ER ELFIN  E  N YTEL+ PI
Sbjct:  303 EINLEEPFKRVDMIDEVSKATGV----DFRNVTLEKAL-ELAKEHGVKLKKYYTVGHIANELFEKLIEKTLVQPTFVMGHPIEISPLT-YEASDPRYVERAELFINGKEYANMYTELSSPI 417          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_MYCA5 (Lysyl-tRNA synthetase OS=Mycoplasma arthritidis (strain 158L3-1) GN=lysS PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.166e-14
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   20 GMIKEITGSYKI---KYHSNGLDKDPIEIDFTPPFRRIDMVEEL-EKIA-NLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451
            GM++   G ++    K +   L+    EID T PF +I+MV+ + EKI  N++   D  ++E  K       + DIK         +++ L   ++EET + P+F+  HP  +SPLA    S P  T+R ELFI   E  N YTELNDP
Sbjct:  275 GMMERTEGVFRYIAEKLNVQKLNFAGKEIDITKPFAKINMVDAVSEKIGVNVRELDDKKALELAK-------QHDIKVEKYFKLGHVIEALFEKYIEETLIQPTFVYGHPLDISPLAFKDESDPRFTQRAELFICTKEFANMYTELNDP 416          
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACC2 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain G9842) GN=lysS PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.166e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454
            TE M++ + K++ G+  I+Y          EI+  P + R+ MV+ +++ +       + SVE  + LA    + +++         ++++     +E+  + P+FI  HP  +SPLAK +   P  T+RFELFI   E  NA+TELNDPI
Sbjct:  288 TENMVAHIAKKVLGTTTIQYGD-------YEINLEPEWTRLHMVDAIKQHSGADFWNPM-SVEEARELAK---EHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPI 427          
The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 300
Match NameE-valueIdentityDescription
SYK_BACC77.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYK_BACC47.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus cereus (strain B... [more]
SYK_BACC17.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYK_BACC07.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYK_BACAN7.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus anthracis GN=lys... [more]
SYK_BACAH7.018e-1431.13Lysyl-tRNA synthetase OS=Bacillus thuringiensis (s... [more]
SYK_SHEDO9.166e-1430.72Lysyl-tRNA synthetase OS=Shewanella denitrificans ... [more]
SYK_MYCS59.166e-1436.36Lysyl-tRNA synthetase OS=Mycoplasma synoviae (stra... [more]
SYK_MYCA59.166e-1435.57Lysyl-tRNA synthetase OS=Mycoplasma arthritidis (s... [more]
SYK_BACC29.166e-1431.13Lysyl-tRNA synthetase OS=Bacillus cereus (strain G... [more]

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Properties
Property NameValue
Genbank descriptionEST0313 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB272 similar to lysyl tRNA synthetase (acc# AAM20403), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bp
TACTGAGAAAATGTTGAGCGGGATGATCAAGGAAATTACAGGGAGCTATA
AAATCAAATATCATTCCAATGGGCTTGATAAGGATCCAATTGAAATTGAT
TTCACTCCCCCTTTCAGAAGGATAGACATGGTAGAGGAGTTGGAGAAGAT
AGCAAACCTCCAAATACCAAAGGACTTGGCCAGTGTAGAAGCAAACAAAT
ACTTAGCAGATGCATGTGTGAAGTTTGATATCAAATGCCCCCCTCCTCAG
ACAACAGCTCGATTATTAGATAAACTTGTGGGGCACTTTCTCGAAGAGAC
GTGTGTAAATCCTTCTTTCATCATTAACCACCCTGAGATAATGAGTCCTC
TGGCAAAATATCACAGATCAAAACCAGGCCTGACTGAACGTTTTGAATTG
TTCATTAATAAGCATGAGGTTTGCAATGCATATACGGAGCTGAATGATCC
TATTG
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