CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_HAHCH (Lysyl-tRNA synthetase OS=Hahella chejuensis (strain KCTC 2396) GN=lysS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.496e-11 Identity = 44/154 (28.57%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIE---IDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADAC-VKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE+ML + +E G+ +++ S D D ++ DF PF R+ +VE + D+ +++ K +A + + + +K V H L + P+FI +P +SPLA+ + P +T+RFE F+ E+ N ++ELNDP Sbjct: 285 TEEMLRWVAQEALGTTEVRNTSKNTDGDVVDEIIYDFGKPFIRMTVVESILHFNPELTLGDIDNMDGAKKVATGLGIPLKASWGLGKIQIEIFEKTVEHRL----MQPTFITEYPTEVSPLARRNDDNPFVTDRFEFFVGGREIANGFSELNDP 434
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PROM5 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9515) GN=lysS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11 Identity = 41/151 (27.15%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE ++ ++ S I Y IDF+ P++RI M +++ + + K ++ + +I P T RLL+++ +E + P+F+ ++P +SPLA+ H + +RFELFI E+ NA++EL DP+ Sbjct: 286 TEDLIKNIVLSCCDSLVINYQDK-------VIDFSKPWKRISMKNVVKEYTGIDFDSFDGDLNKAKKFSEE-INIEIS-PKINTLGRLLNEVFEQKVESQLIEPTFVTDYPIEISPLARRHPKNKEMVQRFELFIAGRELANAFSELIDPV 427
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_HAES2 (Lysyl-tRNA synthetase OS=Haemophilus somnus (strain 2336) GN=lysS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11 Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQ--IPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++L + +I G+ + Y ++ DF PF RI M E + K Q + +DL + +A K I+ L++ + E + P+F++ HP +SPLA+ + P +T+RFELFI E+ N ++ELND Sbjct: 289 TEELLRKLALDILGTTIVPYGD-------LKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQ---KLGIEVQKSWGLGSLVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELND 429
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_VIBVY (Lysyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=lysS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 42/153 (27.45%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKI----ANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++LS + E+ GS + Y + ++F + R+ M E ++ A +Q + ++ + ++ P T +LL+++ G E + P+FI +P +SPLA+ P T+RFE FI EV N ++ELND Sbjct: 293 TEELLSSVALEVLGSTSMPYGEH-------TVEFGGTYTRMSMFEAIKHYNPDHAQIQALTE-EDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELND 437
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_VIBVU (Lysyl-tRNA synthetase OS=Vibrio vulnificus GN=lysS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 42/153 (27.45%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKI----ANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++LS + E+ GS + Y + ++F + R+ M E ++ A +Q + ++ + ++ P T +LL+++ G E + P+FI +P +SPLA+ P T+RFE FI EV N ++ELND Sbjct: 293 TEELLSSVALEVLGSTSMPYGEH-------TVEFGGTYTRMSMFEAIKHYNPDHAQIQALTE-EDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELND 437
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_VIBPA (Lysyl-tRNA synthetase OS=Vibrio parahaemolyticus GN=lysS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 42/153 (27.45%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKI----ANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++LS + E+ GS + Y + ++F + R+ M E ++ A +Q + ++ + + ++ P T +LL+++ G E + P+FI +P +SPLA+ P T+RFE FI EV N ++ELND Sbjct: 288 TEELLSSVALEVLGSTSMPYGED-------TVEFGGKYARMSMFEAIKHYNPDHAQIQALTE-EDLQNRELMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BURP1 (Lysyl-tRNA synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=lysS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 44/154 (28.57%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCV----NPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE+++ + G+ I+Y E+D PFRR+ + + ++K A L+ + +L + + P + L EET P+FII++P +SPLA+ + G+TERFELF+ E+ N ++ELNDP Sbjct: 293 TERLIRQAAVDALGTATIRYQGR-------ELDLAKPFRRLTITQAIQKYAPNYTDGQLSD---DAFLRGELKRLGVDVTQPAFLNAGIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDP 436
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BORPD (Lysyl-tRNA synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=lysS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCV----NPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE +L TGS + Y E+D + PF R+ + E + K A A ++ ++ K P L L EET NP++II++P +SPLA+ ++PG+TERFELF+ E+ N ++ELNDP Sbjct: 291 TEHVLRQAAIAATGSAVLTYQDR-------ELDLSRPFDRLTICEAILKYAPAYTQ---AQLDDAAFVRAELKKLGADVDGPVLARAGLGALQLALFEETAEAQLWNPTYIIDYPVEVSPLARASDTRPGITERFELFMTGREIANGFSELNDP 434
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SHIF8 (Lysyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=lysS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.561e-11 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + ++I G ++ Y + +DF PF ++ M E ++K DL + ++ K +A++ I R++ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQDILGKTEVTYGD-------VTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAES---IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SHIBS (Lysyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=lysS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.561e-11 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + ++I G ++ Y + +DF PF ++ M E ++K DL + ++ K +A++ I R++ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQDILGKTEVTYGD-------VTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAES---IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELND 432 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |