CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK1_ECOL6 (Lysyl-tRNA synthetase OS=Escherichia coli O6 GN=lysS PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.561e-11 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + ++I G ++ Y + +DF PF ++ M E ++K DL + ++ K +A++ I R++ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQDILGKTEVTYGD-------VTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAES---IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PASMU (Lysyl-tRNA synthetase OS=Pasteurella multocida GN=lysS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11 Identity = 45/153 (29.41%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACV----KFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++L + +I G+ + Y +E DF PF RI M + + L+ + V+ + Y D V K I+ L++ + E + P+F++ HP +SPLA+ + P +T+RFELFI E+ N ++ELND Sbjct: 289 TEELLRKLAMDILGTTIVPYGE-------LEFDFGKPFERITMHDAI-----LKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWGLGSLVNVIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELND 429
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_MYCHP (Lysyl-tRNA synthetase OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=lysS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11 Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = 2 Query: 20 GMIKEITGSYKIK-YHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 G+ K + + IK NG D + F PF+R++M++ + + N+ I K + + + K IK ++++L ++EET + P+F+ HP +SP A T R E FI E N +TELNDPI Sbjct: 282 GVFKHLMNKFNIKEVKFNGFD-----MTFNFPFKRVNMIDAMSEKINVDIRK-----LNEEQMFELAKKHGIKIEKFFRYGHIINELFEKYVEETLMEPTFVYGHPIEISPTAAIDPDDKRFTTRAETFIGTKEFANMFTELNDPI 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_HAEIE (Lysyl-tRNA synthetase OS=Haemophilus influenzae (strain PittEE) GN=lysS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11 Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQ--IPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE++L + +I G+ +KY +E DF PF RI + + K + + +DL + K A+ + I+ +++ + E + P+F++ HP +SPLA+ + P +T+RFELFI E+ N ++ELND Sbjct: 290 TEELLRKLAIDILGTTIVKYGD-------LEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAE---RLGIEVQKSWGLGSIVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELND 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_ERWT9 (Lysyl-tRNA synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=lysS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11 Identity = 42/149 (28.19%), Postives = 70/149 (46.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + +++ GS + Y + DF PF ++ M E + K DLA + + +A + IK RL+ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQDVLGSTVVPYGDQ-------QFDFGKPFEKLTMKEAILKYRPQTDLADLADFDKSVAIAQS---LGIKVEKSWGLGRLVTEIFEETAEAHLIQPTFITEYPAEVSPLARRNDMDPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BURVG (Lysyl-tRNA synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=lysS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11 Identity = 43/154 (27.92%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVN----PSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE+++ + G+ I+Y E+D PF R+ + + ++K A L+ + +L + + P + L EET + P++II++P +SPLA+ + PG+TERFELF+ E+ N ++ELNDP Sbjct: 293 TEQLIRQAAIDALGTATIQYQGR-------ELDLAKPFHRLTITQAIQKYAPQYTDGQLSD---DAFLRTELKRLGVDVSQPAFLNAGIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDP 436
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SHIDS (Lysyl-tRNA synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lysS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 40/149 (26.85%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + + I G ++ Y + +DF PF ++ M E ++K DL + ++ K +A++ I R++ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQNILGKTEVTYGD-------VTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAES---IGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PECCP (Lysyl-tRNA synthetase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=lysS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 41/149 (27.52%), Postives = 70/149 (46.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + +++ GS ++Y DF PF ++ M E + K DL +E +A + IK R++ ++ E + + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TENLFRTLTQDVLGSTTVEYGDQ-------TFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQS---LGIKIEKSWGLGRIVTEIFEETAESSLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_ENT38 (Lysyl-tRNA synthetase OS=Enterobacter sp. (strain 638) GN=lysS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 41/149 (27.52%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELND 448 TE + + + I G+ ++ Y DF PF ++ M E ++K DL + ++ K +A++ IK R++ ++ E + P+FI +P +SPLA+ + P +T+RFE FI E+ N ++ELND Sbjct: 294 TESLFRTLAQNILGTTEVPYGDE-------VFDFGKPFVKLTMREAIKKYRPETEMADLDNYDSAKAIAES---IGIKVEKSWGQGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELND 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BURTA (Lysyl-tRNA synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=lysS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 44/154 (28.57%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCV----NPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE+++ + G+ I+Y E+D PF R+ + + ++K A L+ + +L + + P + L EET P+FII++P +SPLA+ + G+TERFELFI E+ N ++ELNDP Sbjct: 293 TERLIRQAAVDALGTATIQYQGR-------ELDLAQPFHRLTITQAIQKYAPSYTDGQLSD---DAFLRSELKRLGVDVTQPAFLNAGIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFITGREIANGFSELNDP 436 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |