CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THETH (Lysyl-tRNA synthetase OS=Thermus thermophilus GN=lysS PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E++LSG++ + GS+++ Y L+ F PPFRRI VE L++ A L P D +E + ADA + P +LLDKL G ++E +P+F+ + P +SPLAK HR KPGL ER++L+ E+ Y+ELNDP+ Sbjct: 278 EELLSGLVLHLFGSHEVPYQGRVLN-------FKPPFRRISFVEALKEKAGL--PFDPLDLERLRLWADAHHPELSQVP----NYKLLDKLFGIYVEPELQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGGMELAPCYSELNDPL 414
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THET8 (Lysyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=lysS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E++LSG++ + GS+++ Y L+ F PPFRRI VE L++ A L P D +E + ADA + P +LLDKL G ++E +P+F+ + P +SPLAK HR KPGL ER++L+ E+ Y+ELNDP+ Sbjct: 278 EELLSGLVLHLFGSHEVPYQGRVLN-------FKPPFRRISFVEALKEKAGL--PFDPLDLERLRLWADAHHPELSQVP----NYKLLDKLFGIYVEPELQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGGMELAPCYSELNDPL 414
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THET2 (Lysyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=lysS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E++LSG++ + GS+++ Y L+ F PPFRRI VE L++ A L P D +E + ADA + P +LLDKL G ++E +P+F+ + P +SPLAK HR KPGL ER++L+ E+ Y+ELNDP+ Sbjct: 278 EELLSGLVLHLFGSHEVPYQGRVLN-------FKPPFRRISFVEALKEKAGL--PFDPLDLERLRLWADAHHPELSQVP----NYKLLDKLFGIYVEPELQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGGMELAPCYSELNDPL 414
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNPX (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain WH8102) GN=lysS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPP-PQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+M+S + +E+ GS +I Y EID +PP+RR M E +E+ L D S + + A A + P + RLL++ +E T + P+F+ ++P +SPLA+ HRSKPGL ERFELFI E NA++EL DP+ Sbjct: 282 TEQMVSAVCQEVCGSCQITYQDT-------EIDLSPPWRRATMHELVEEATGL----DFNSFSSREAAAVAMTGKGLHAPELADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTDPV 422
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PROM3 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9303) GN=lysS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPP-QTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++S + +I GS +I Y IEID TPP+RR M E +++ L D A A + ++ P + RLL++ +E + + P+F++++P +SPLA+ HRSKPGL ERFELFI E NA++EL DP+ Sbjct: 295 TEQLISSVCTQICGSTRITYQG-------IEIDLTPPWRRASMHELVQEATGL----DFMGFADRAVAASAMARAGLEVPSKADSVGRLLNEAFEQAVEVSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFIVGRETANAFSELIDPL 435
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PORG3 (Lysyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=lysS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.554e-20 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+ML + ++ G+ ++K IDF P+RR+ M+E + + + I S L C K ++ +L+D++ G E+ + P+FI ++P+ MSPL K HR+ P LTERFEL +N E+ NAY+ELNDPI Sbjct: 295 TEQMLERICMDVLGTTQVKVGEK-------LIDFKAPYRRVTMIEAIHEHTGIDI-----SGMNEAELRQVCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELNDPI 433
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNWW (Lysyl-tRNA synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=lysS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.460e-19 Identity = 46/150 (30.67%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E ++S ++ ++ GS +I + ++DFTPP+RR+ M++ +++ A L D + +++++ A + ++ + L++++ F+E+ + P+F+ HP +SPLAK + P T+RFELFI + E+ NA++ELNDPI Sbjct: 281 EDLISAVMLKVNGSMQIDFEGE-------QLDFTPPWRRVTMLDAIKEAAGL----DFSLIKSDEDACQAAWQLGLEVKAGASRGELINEIFEQFVEDKLIQPTFVYGHPVEVSPLAKRNLETPEFTDRFELFIMQREIANAFSELNDPI 419
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PELPB (Lysyl-tRNA synthetase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=lysS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.460e-19 Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 EI PPFRR+ +++ + + I S E +Y A ++ P ++ +++D++ G F+E + P+FII++P MSPLAK H S+PG+ ERFEL I EVCN+++ELNDP+ Sbjct: 326 EISLKPPFRRLSIIDAITEYTGQNIAGQ--SEEQLRYTAK---DLGLELDPKISSGKIIDEIFGEFVEPKLIQPTFIIDYPTEMSPLAKEHPSQPGIVERFELIIGGKEVCNSFSELNDPV 441
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOPE (Lysyl-tRNA synthetase OS=Clostridium perfringens GN=lysS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.907e-19 Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E M++ + +++ GS K+ Y EIDFTPP+RRI MV+ +++ A + + + EA + ++F K T +L+ L + E+ + P+F+I++P +SPL K R TERFE F+ EVCNAY+ELNDPI Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFP-KPLDKVTKGEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPI 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOP1 (Lysyl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=lysS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.907e-19 Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E M++ + +++ GS K+ Y EIDFTPP+RRI MV+ +++ A + + + EA + ++F K T +L+ L + E+ + P+F+I++P +SPL K R TERFE F+ EVCNAY+ELNDPI Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFP-KPLDKVTKGEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPI 430 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |