CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PORGI (Lysyl-tRNA synthetase OS=Porphyromonas gingivalis GN=lysS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19 Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+ML + ++ G+ ++K IDF P++R+ M+E + + + I S L C K ++ +L+D++ G E+ + P+FI ++P+ MSPL K HR+ P LTERFEL +N E+ NAY+ELNDPI Sbjct: 295 TEQMLERICMDVLGTTQMKVGGK-------LIDFKAPYKRVTMIEAIHEHTGIDI-----SGMNEAELRQVCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELNDPI 433
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOPS (Lysyl-tRNA synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=lysS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19 Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 5 EKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 E M++ + +++ GS K+ Y EIDFTPP+RRI MV+ +++ A + + + EA + ++F K T +L+ L + E+ + P+F++++P +SPL K R TERFE F+ EVCNAY+ELNDPI Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFP-KPLDKVTKGEVLNMLFEEYGEDKLIQPTFLVDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPI 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_AZOPC (Lysyl-tRNA synthetase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=lysS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19 Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+ML + EI GS ++K I+F P+RRI M++ +E+ + I A + N+ L + C I+ ++ +L+D++ G E + P+FII++P+ MSPL K HR LTERFEL +N E+ NAY+ELNDPI Sbjct: 288 TEQMLEHICIEILGSTELKIGE-------YIINFKAPYRRITMIDVIEENTGVNI----AGMNENQ-LREVCRFLHIEEDKTMSSGKLIDEIFGKKCEWKYIQPTFIIDYPKEMSPLCKCHRQNAELTERFELIVNGFELANAYSELNDPI 426
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_FERNB (Lysyl-tRNA synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=lysS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.236e-18 Identity = 54/151 (35.76%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE++++ +++++ G+ KI Y EIDFT P+RR+ M + +++ + I +D A K LA+ V+ DI +++KL +E+ + P+F++ HP +SPLAK HR P +TERFEL I E+ NA++ELNDP+ Sbjct: 278 TEELITYLVEQLYGTTKITYQGQ-------EIDFTRPWRRVKMRDFIKENLGVDIIEDSDETMA-KVLAENGVEVDIN-----DRGHMIEKL-WDLVEDKVIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAFSELNDPV 414
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THETN (Lysyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=lysS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.614e-18 Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPP---QTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE++ + + +++ GS KI Y EID TPP++RI MV+ +++ + K EA K D + ++K P + A + D+LV E+ + P+F++++P +SPLAK R P T RFE FI EV NA++ELNDPI Sbjct: 288 TEQLFAYVAEKVNGSTKIIYQGT-------EIDLTPPWKRITMVDAIKEYVGIDFEKVATDEEARKIAKD--LNLELKKPDMKKGEVIALVFDELV----EKHLIQPTFVMDYPVEVSPLAKRKRDNPAFTSRFEAFIYGREVANAFSELNDPI 428
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNSC (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain CC9605) GN=lysS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.108e-18 Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPP-PQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+M+S + +E+ G+ I Y EID PP+RR M E ++ L D + + A A + P + RLL++ +E T + P+F+ ++P +SPLA+ HRSKPGL ERFELFI E NA++EL DP+ Sbjct: 282 TEQMVSAVCEEVCGTTTITYQGT-------EIDLAPPWRRATMHELVQDATGL----DFNGFSSREEAAAAMTAKGLHAPELADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTDPV 422
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PELLD (Lysyl-tRNA synthetase OS=Pelodictyon luteolum (strain DSM 273) GN=lysS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.108e-18 Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 EI PFRR+ + + + + +I + E D ++ D P + +++D++ G F+E + P+FI ++P MSPLAK HRSKPGL ERFEL E+CN+++ELNDP+ Sbjct: 316 EISLEAPFRRLTIADSIREYTGAEI-EGKTETELRNLAKDLGLELD----PKIGSGKIIDEIFGEFVEPKLIQPTFITDYPTEMSPLAKPHRSKPGLVERFELIAGGKEICNSFSELNDPV 431
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNY3 (Lysyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=lysS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.134e-18 Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE +++ + + G+ KI Y EID TPP++RI M E ++ + + A + A + CP + LL+ +E T + P+FII+ P +SPLAK HRSKPGL ERFELF+ E+ N+++EL DPI Sbjct: 294 TEALVTTAAQAVLGTLKITYQGE-------EIDLTPPWKRITMHEAVQLETGIDFSQFTDLETAKQAATKAGIGVPEDCP---SLGHLLNHAFEQKVEGTLMQPTFIIDFPVEISPLAKPHRSKPGLVERFELFVYGRELANSFSELTDPI 434
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNS9 (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain CC9902) GN=lysS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.134e-18 Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCP-PPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M++ + +++ G +I Y +ID TPP+RR M E +E+ L +A A+A ++ P + RLL++ +E + + P+F+ ++P +SPLA+ HRSKPGL ERFELFI E NA++EL DP+ Sbjct: 282 TEAMIAEVCQQVCGGTRIHYQGT-------DIDLTPPWRRATMHELVEEATGLNFEAFTTRAQA----AEAMEAAGLEVPGAADSVGRLLNEAFEQRVEASLIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPV 422
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PELTS (Lysyl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=lysS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.134e-18 Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++S + E G+ KI+Y EID PP+ RI M+E ++ A L ++ EA K + A + ++ P + +++K+ +E + P+F++++P +SPLAK P LT RFELFI E+ NA++ELNDPI Sbjct: 294 TEELISAVAVEALGTTKIEYQGT-------EIDLAPPWPRIPMLETIKVHAGLDFGALKSAEEAFKAVEQAGIGLELD--PSDSWGTIVNKVFEEVVEPKLIQPTFVVDYPVEISPLAKRKAEDPELTYRFELFIYGREIANAFSELNDPI 435 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |