CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOTE (Lysyl-tRNA synthetase OS=Clostridium tetani GN=lysS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.134e-18 Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTT-ARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M++ + +++ G+ K+KY EI+F PP++RI MV+ +++ + + + EA + + F++K T A +L+ ++E+ + P+F+ ++P +SPL+K P TERFE F+ E+CNAYTELNDPI Sbjct: 288 TENMVAYIAEKVCGNTKVKYEET-------EIEFRPPWKRITMVDSVKEYSGVDFNEIKTDEEARELVKGK--DFELKKKLEDCTKADILNLFFEEYVEKNLIQPTFVCDYPVEISPLSKKKNDNPEYTERFEGFVYGRELCNAYTELNDPI 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CHLCH (Lysyl-tRNA synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=lysS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.134e-18 Identity = 42/121 (34.71%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 92 EIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 EI PPFRR+ + + + + + KD+ + ++ + L + + ++ P +++D++ G F+E + P+FI ++P MSPLAK H ++PG+ ERFEL + EVCN+++ELNDP+ Sbjct: 326 EISVKPPFRRLTISDAIAEYTD----KDIRN-KSEEELRNIAKELGLELDPKIGNGKIIDEIFGEFVEPKLIQPTFITDYPTEMSPLAKEHAAQPGIVERFELIVGGKEVCNSFSELNDPV 441
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SULAC (Lysyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=lysS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.046e-17 Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTAR--LLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+ML ++K I KIKY G + I+F+ FR+I M++ L ++ + K S E K L D K +K P R +++KL + T + P+F++++P +PL K HRSK GL ERFEL++ E+ NAYTELNDPI Sbjct: 283 TEEMLQDVVKNINNDSKIKYSIGGKE---YTIEFSQ-FRKITMIDSLTEVLGKDVDK--MSDEELKSLMD---KNGLK-PRGNMYIRGLMIEKLFDKLVTPTLIQPTFVLDYPVETTPLCKPHRSKQGLVERFELYVAGMELANAYTELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_METMJ (Lysyl-tRNA synthetase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=lysS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.046e-17 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE++LS + +++ G+ + + ++DF+ P+RR+ M E + + A + P ++ E + + + CV+ C T L HF E+ + P+FI + P SPLAK HRSK GLTERFELFI E+ N ++ELNDP+ Sbjct: 283 TEEILSHLAEKVLGTTVCSFAGH-------DLDFSRPWRRLTMEEAVREYAGIDFPA-MSLEELHAFGLEHCVE---GCESAATRGEYLVLFFEHFGEKHLIQPTFIYDFPIENSPLAKKHRSKEGLTERFELFIAGMEMANGFSELNDPL 422
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACTN (Lysyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=lysS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.046e-17 Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIK-CPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TEK+L + + GS + D I F P+RR+ +++ +++ + + ++ + + C + ++ +L+D++ G F E + + P+FI ++P MSPL K HRSKPGLTERFEL +N E+ NAY+ELNDP+ Sbjct: 293 TEKLLERICIAVNGSTETVV-------DGKTISFKAPYRRLPILDAIKEKTGYDL-----NGKSEEEIRQICKELKMEEIDDTMGKGKLIDEIFGEFCEGSYIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPL 432
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNR3 (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain RCC307) GN=lysS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.367e-17 Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPP-PQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+++S + +++ GS I Y EI+ P +RR M E +++ L D A + + A A ++ P + RLL++ +EET + P+F+ ++P +SPLA+ HRSKPGL ERFELFI E NA++EL DP+ Sbjct: 278 TEELISSVTQQVCGSTLINYQGT-------EINLAPGWRRATMHELVKEATGL----DFAGFSSREDAAAAMEAKGLQTPALADSVGRLLNEAFEQAVEETLIQPTFVTDYPVEISPLARSHRSKPGLVERFELFIVGREHGNAFSELTDPV 418
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLONN (Lysyl-tRNA synthetase OS=Clostridium novyi (strain NT) GN=lysS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.785e-17 Identity = 54/153 (35.29%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLA--DACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M++ + +++ G+ K+ Y EIDF PP+RRI MV+ +++ A + + EA + + +K ++K T +L L F EE + P+F+ ++P+ SPL K R LTERFE F+ E+CNAY+ELNDPI Sbjct: 297 TENMVAYVCEKVNGTTKVMYEGT-------EIDFKPPWRRITMVDAVKEYAGVDFNEVKTDEEAREIAKSKELELKKELK---DCTKGDILVALFEEFGEEKLMQPTFVCDYPKENSPLTKKKRGNDELTERFEGFVYGREICNAYSELNDPI 439
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOBH (Lysyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=lysS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.785e-17 Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M++ + +++ G+ K++Y EIDFTPP+RR+ MV+ + + A + +EA + ++F K T +L L F E+ + P+FI ++P SPL K R TERFE F+ EVCNAY+ELND I Sbjct: 288 TENMIAYICEKVLGTTKVQYEGT-------EIDFTPPWRRLTMVDAVREYAGVDFNTIKDDIEARTIAKEKHIEFK-KELKDCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSI 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_CLOB1 (Lysyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=lysS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.785e-17 Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE M++ + +++ G+ K++Y EIDFTPP+RR+ MV+ + + A + +EA + ++F K T +L L F E+ + P+FI ++P SPL K R TERFE F+ EVCNAY+ELND I Sbjct: 288 TENMIAYICEKVLGTTKVQYEGT-------EIDFTPPWRRLTMVDAVREYAGVDFNTIKDDIEARTIAKEKHIEFK-KELKDCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSI 430
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THELT (Lysyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=lysS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.044e-17 Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKY-LADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE ++S ++ + GSYK+ Y +E+DF PP++RI M E ++ ++ I +D + E Y L + V+ D K + ++++KL +EE + P+F+++HP +SPLAK HR P LTERFE I E+ NA++ELNDP Sbjct: 281 TESLISELVLHLYGSYKLTYQG-------VELDFKPPWKRIKMREFIKSRLDVDILED--NDEKLYYVLKERGVEPDTK-----SREKMIEKL-WDLVEEEVIQPTFLMDHPVDISPLAKRHRDDPRLTERFEPIIFGMEMGNAFSELNDP 416 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |