CB322191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_STRA1 (Lysyl-tRNA synthetase OS=Streptococcus agalactiae serotype Ia GN=lysS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.193e-17 Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE ++ + K + G I Y EI PF+R+ MV+ +++I + K++ EA + V + T +++ F+E+T + P+F+ HP +SPLAK + + P T+RFELF+ E NA+TELNDPI Sbjct: 288 TEGIIQHVTKTVKGDGPINYQGT-------EIKINEPFKRVHMVDAVKEITGIDFWKEMTLEEAQALAQEKNVPLEKHFT---TVGHIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFVMTKEYANAFTELNDPI 428
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNP6 (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=lysS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.782e-17 Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIP--KDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEE----TCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE +++ + +++ GS ++ Y ID PP++R M E + + KDL + A A V D CP L KL+ H EE T + P+F+I++P +SPLAK HRSKPGL ERFELFI E N+++EL DP+ Sbjct: 286 TETLIAQVAEQVVGSLQVPYQGQ-------TIDLAPPWKRATMAELVLAATGIDFESLKDLEAGIAAVKAAGIPVPED--CPN-------LGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIVGRETANSFSELTDPV 426
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_SYNE7 (Lysyl-tRNA synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=lysS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.782e-17 Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIP--KDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEE----TCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE +++ + +++ GS ++ Y ID PP++R M E + + KDL + A A V D CP L KL+ H EE T + P+F+I++P +SPLAK HRSKPGL ERFELFI E N+++EL DP+ Sbjct: 286 TETLIAQVAEQVVGSLQVPYQGQ-------TIDLAPPWKRATMAELVLAATGIDFESLKDLEAGIAAVKAAGIPVPED--CPN-------LGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIVGRETANSFSELTDPV 426
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_LEPIN (Lysyl-tRNA synthetase OS=Leptospira interrogans GN=lysS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.858e-17 Identity = 51/151 (33.77%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDI-KCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE++++ + ++I G+ KI+Y G D ID +PP++R V+ +++ + + + ++ EA K ++ +K D+ KC QT ++ D++ E + P FI ++P+ +SPLAK + KPG ERFE ++ E+ NA+TELNDP Sbjct: 286 TERLITHLAQKICGTLKIQY---GKDL----IDLSPPWKRTTYVDIIKEYSGIDFSQIISLEEAKKKASE--LKVDVSKC---QTIWKVADEVFSEKAEPNLIQPIFITDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELNDP 424
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_LEPIC (Lysyl-tRNA synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=lysS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.858e-17 Identity = 51/151 (33.77%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDI-KCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDP 451 TE++++ + ++I G+ KI+Y G D ID +PP++R V+ +++ + + + ++ EA K ++ +K D+ KC QT ++ D++ E + P FI ++P+ +SPLAK + KPG ERFE ++ E+ NA+TELNDP Sbjct: 286 TERLITHLAQKICGTLKIQY---GKDL----IDLSPPWKRTTYVDIIKEYSGIDFSQIISLEEAKKKASE--LKVDVSKC---QTIWKVADEVFSEKAEPNLIQPIFITDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELNDP 424
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACST (Lysyl-tRNA synthetase OS=Bacillus stearothermophilus GN=lysS PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.858e-17 Identity = 47/151 (31.13%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE +++ + E+ G+ KI+Y + +D TP +RR+ MV+ +++ + + ++ EA + + ++ P T ++++ +E+ + P+FI HP +SPLAK + P T+RFELFI E NA+TELNDPI Sbjct: 285 TENLIAHIATEVLGTTKIQYGEH-------LVDLTPEWRRLHMVDAIKEYVGVDFWRQMSDEEARELAKE----HGVEVAPHMTFGHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPI 424
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_BACHD (Lysyl-tRNA synthetase OS=Bacillus halodurans GN=lysS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.157e-16 Identity = 46/151 (30.46%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE +++ + K++ G+ I Y + E++ P +RR+ MVE +++ + +++ EA + ++ T ++++ HF+EE + P+F+ HP +SPLAK + P T+RFELFI E NA++ELNDPI Sbjct: 286 TELLIAHIAKDVLGTTTITYGEH-------EVNLEPKWRRVHMVEAIKEETGVDFWNEMSDEEARALAKE----HNVPVKETMTYGHVVNEFFEHFVEEKLIQPTFVYGHPVAISPLAKKNPDDPRFTDRFELFIVGREHANAFSELNDPI 425
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_THEM4 (Lysyl-tRNA synthetase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=lysS PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.511e-16 Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE++ +++++ G+ KIKY + +E+DF+ P+RRI M + +++ + I +D L + V+ +I+ +++KL +E+ V P+F++ HP +SPLAK HR P +TERFEL I E+ NA++ELNDP+ Sbjct: 281 TEELFVYIVEKLFGTTKIKYQN-------VELDFSRPWRRIKMRDFIKEHLGVDILEDSMG-RMMDVLEEHGVEVEIR-----DKGHMIEKL-WDLVEDKVVQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAFSELNDPV 417
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_PROM4 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=lysS PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.511e-16 Identity = 53/155 (34.19%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANL---QIPKDLASVEANKYLADACVKFDIKCPP-PQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE+M+S + +I GS I+Y E+D TPP+RRI M E + + L + +D++ A + P + RL+++ +E P+F++++P +SPLA+ HRSKPG+ ERFELFI E NA++EL DP+ Sbjct: 288 TEEMISFVCSQICGSTTIQYQGK-------EVDLTPPWRRITMHELVLESTGLDFYEFGQDISKAST------AMQSVGLNVPDHADSVGRLMNEAFEQAVEGDLFQPTFVMDYPIEISPLARKHRSKPGIVERFELFIAGRETANAFSELIDPV 429
BLAST of CB322191 vs. ExPASy Swiss-Prot
Match: SYK_GRAFK (Lysyl-tRNA synthetase OS=Gramella forsetii (strain KT0803) GN=lysS PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.511e-16 Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 TEKMLSGMIKEITGSYKIKYHSNGLDKDPIEIDFTPPFRRIDMVEELEKIANLQIPKDLASVEANKYLADACVKFDIKCPPPQTTARLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKYHRSKPGLTERFELFINKHEVCNAYTELNDPI 454 TE++L + + G+ + + +I+F P++R+ M + + + I + ++ K L +A DI+ +L+D++ G E + P+FI ++P+ MSPL K HR P LTERFEL + E+ NAY+ELNDP+ Sbjct: 295 TEQLLEHCAEAVNGTTDATFGEH-------KINFKAPYKRLSMTDAIIEYTGFDI-----TGKSEKELYEAAKGMDIEVDDTMGKGKLIDEIFGEKCEGKFIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPL 433 The following BLAST results are available for this feature:
BLAST of CB322191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322191 ID=CB322191; Name=CB322191; organism=Citrus sinensis; type=EST; length=455bpback to top |