CB322194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_SHEAM (Thiamine biosynthesis protein thiC OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=thiC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.531e-19 Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVARGRAIIP+N H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K+ W+T Sbjct: 198 FVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWST 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_BAUCH (Thiamine biosynthesis protein thiC OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=thiC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.531e-19 Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIPSN H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K+ WAT Sbjct: 197 FVRQEVAAGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWAT 255
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PSEMY (Thiamine biosynthesis protein thiC OS=Pseudomonas mendocina (strain ymp) GN=thiC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR+EVARGRAIIP+N H+ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVRSEVARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_LEPBL (Thiamine biosynthesis protein thiC OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=thiC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR E+A GRAI+PSN+ H ELEPMI+GRNFLVK+NANIGNSA+ SSIEEEV K+ WA Sbjct: 90 FVRLEIACGRAILPSNRNHPELEPMIIGRNFLVKINANIGNSALGSSIEEEVEKLHWA 147
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_LEPBJ (Thiamine biosynthesis protein thiC OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=thiC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR E+A GRAI+PSN+ H ELEPMI+GRNFLVK+NANIGNSA+ SSIEEEV K+ WA Sbjct: 90 FVRLEIACGRAILPSNRNHPELEPMIIGRNFLVKINANIGNSALGSSIEEEVEKLHWA 147
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_CELJU (Thiamine biosynthesis protein thiC OS=Cellvibrio japonicus (strain Ueda107) GN=thiC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR+EVARGRAIIP+N H+ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVRSEVARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_VIBPA (Thiamine biosynthesis protein thiC OS=Vibrio parahaemolyticus GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIPSN H E EPMI+GRNFLVKVNANIGNS+V SSIEEEV K+ WAT Sbjct: 198 FVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLVWAT 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_VIBHB (Thiamine biosynthesis protein thiC OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIPSN H E EPMI+GRNFLVKVNANIGNS+V SSIEEEV K+ WAT Sbjct: 198 FVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLVWAT 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_SHEWM (Thiamine biosynthesis protein thiC OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVARGRAIIP N H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K+ W+T Sbjct: 198 FVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWST 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_SHESH (Thiamine biosynthesis protein thiC OS=Shewanella sediminis (strain HAW-EB3) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVARGRAIIP N H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K+ W+T Sbjct: 198 FVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWST 256 The following BLAST results are available for this feature:
BLAST of CB322194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322194 ID=CB322194; Name=CB322194; organism=Citrus sinensis; type=EST; length=182bpback to top |