CB322194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_SHEHH (Thiamine biosynthesis protein thiC OS=Shewanella halifaxensis (strain HAW-EB4) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVARGRAIIP N H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K+ W+T Sbjct: 198 FVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWST 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_OLICO (Thiamine biosynthesis protein thiC OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR+E+ARGRAIIP N H ELEPMI+GRNFL K+NANIGNSAV SS+EEEV K+ WA Sbjct: 184 FVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVWA 241
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_MYXXD (Thiamine biosynthesis protein thiC OS=Myxococcus xanthus (strain DK 1622) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR E+ARGRAIIP+N H ELEPMI+GRNFLVK+NANIGNSAV SSIEEEV K+ W+ Sbjct: 194 FVRDEIARGRAIIPANINHPELEPMIIGRNFLVKINANIGNSAVTSSIEEEVEKMVWS 251
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_BRASB (Thiamine biosynthesis protein thiC OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR+E+ARGRAIIP N H ELEPMI+GRNFL K+NANIGNSAV SS+EEEV K+ WA Sbjct: 184 FVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVWA 241
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_BRAJA (Thiamine biosynthesis protein thiC OS=Bradyrhizobium japonicum GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR+E+ARGRAIIP N H ELEPMI+GRNFL K+NANIGNSAV SS+EEEV K+ WA Sbjct: 184 FVRSEIARGRAIIPCNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVWA 241
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_ACIBY (Thiamine biosynthesis protein thiC OS=Acinetobacter baumannii (strain AYE) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIP+N H ELEPMI+GRNFLVK+NANIGNSA+ SSI+EEV K+ WAT Sbjct: 194 FVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSSIDEEVAKMTWAT 252
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_ACIBT (Thiamine biosynthesis protein thiC OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=thiC PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIP+N H ELEPMI+GRNFLVK+NANIGNSA+ SSI+EEV K+ WAT Sbjct: 194 FVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSSIDEEVAKMTWAT 252
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_ACIBS (Thiamine biosynthesis protein thiC OS=Acinetobacter baumannii (strain SDF) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIP+N H ELEPMI+GRNFLVK+NANIGNSA+ SSI+EEV K+ WAT Sbjct: 194 FVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSSIDEEVAKMTWAT 252
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_ACIBC (Thiamine biosynthesis protein thiC OS=Acinetobacter baumannii (strain ACICU) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIP+N H ELEPMI+GRNFLVK+NANIGNSA+ SSI+EEV K+ WAT Sbjct: 194 FVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSSIDEEVAKMTWAT 252
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_ACIB5 (Thiamine biosynthesis protein thiC OS=Acinetobacter baumannii (strain AB0057) GN=thiC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.317e-19 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIP+N H ELEPMI+GRNFLVK+NANIGNSA+ SSI+EEV K+ WAT Sbjct: 194 FVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSSIDEEVAKMTWAT 252 The following BLAST results are available for this feature:
BLAST of CB322194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322194 ID=CB322194; Name=CB322194; organism=Citrus sinensis; type=EST; length=182bpback to top |