CB322194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_COLP3 (Thiamine biosynthesis protein thiC OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=thiC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.364e-19 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVARGRAIIP N H E EPMI+GRNFL+KVNANIGNSAV SSIEEEV K+ W+T Sbjct: 211 FVRDEVARGRAIIPVNINHPECEPMIIGRNFLIKVNANIGNSAVTSSIEEEVEKLVWST 269
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_VIBVY (Thiamine biosynthesis protein thiC OS=Vibrio vulnificus (strain YJ016) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIPSN H E EPMI+GRNFLVKVNANIGNS+V SSIEEEV K+ W+T Sbjct: 198 FVRREVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLVWST 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_VIBVU (Thiamine biosynthesis protein thiC OS=Vibrio vulnificus GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR EVA GRAIIPSN H E EPMI+GRNFLVKVNANIGNS+V SSIEEEV K+ W+T Sbjct: 198 FVRREVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLVWST 256
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_SACD2 (Thiamine biosynthesis protein thiC OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = -3 Query: 4 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWAT 180 FVR+EVA GRAIIP+N H ELEPMI+GRNFLVK+N NIGNSAV SSIEEEV K+ W T Sbjct: 196 FVRSEVACGRAIIPANINHPELEPMIIGRNFLVKINGNIGNSAVTSSIEEEVAKLTWGT 254
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_RHOFD (Thiamine biosynthesis protein thiC OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR EVARGRAIIP+N H E+EPM++GRNFLVK+NANIGNSAV SSIEEEV K+ W+ Sbjct: 189 FVRDEVARGRAIIPANINHPEVEPMVIGRNFLVKINANIGNSAVTSSIEEEVEKLVWS 246
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PSEAE (Thiamine biosynthesis protein thiC OS=Pseudomonas aeruginosa GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR EVARGRAIIP+N H ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PSEAB (Thiamine biosynthesis protein thiC OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR EVARGRAIIP+N H ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PSEA8 (Thiamine biosynthesis protein thiC OS=Pseudomonas aeruginosa (strain LESB58) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR EVARGRAIIP+N H ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PSEA7 (Thiamine biosynthesis protein thiC OS=Pseudomonas aeruginosa (strain PA7) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = -3 Query: 10 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 180 FVR EVARGRAIIP+N H ELEPMI+GRNFLVK+N NIGNSA+ SSIEEEV K+ W Sbjct: 194 FVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTW 250
BLAST of CB322194 vs. ExPASy Swiss-Prot
Match: THIC_PARL1 (Thiamine biosynthesis protein thiC OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=thiC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 46/58 (79.31%), Postives = 50/58 (86.21%), Query Frame = -3 Query: 7 FVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWA 180 FVR EVA GRAIIPSN H ELEPMI+GRNFLVK+NANIGNSAVASS+ EEV K+ WA Sbjct: 184 FVRDEVAAGRAIIPSNINHPELEPMIIGRNFLVKINANIGNSAVASSVAEEVDKMVWA 241 The following BLAST results are available for this feature:
BLAST of CB322194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322194 ID=CB322194; Name=CB322194; organism=Citrus sinensis; type=EST; length=182bpback to top |