CB322198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_ACOAM (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Acorus americanus GN=ndhD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.276e-14 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMI 114 TCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW ++ Sbjct: 245 TCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVL 282
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_DAUCA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Daucus carota GN=ndhD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.279e-14 Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELL HAHSIFSPW +IV Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLSHAHSIFSPWLVIV 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_CRYJA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cryptomeria japonica GN=ndhD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.279e-14 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAG+LLKMG YGLIRINMELLPHAHS+FSPW +I+ Sbjct: 245 TCMLLAGVLLKMGGYGLIRINMELLPHAHSLFSPWLIII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_COFAR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Coffea arabica GN=ndhD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.279e-14 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGL+RINMELL HAHSIFSPW +IV Sbjct: 245 TCMLLAGILLKMGAYGLVRINMELLSHAHSIFSPWLLIV 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_WHEAT (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Triticum aestivum GN=ndhD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_ORYSJ (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhD PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_ORYSI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oryza sativa subsp. indica GN=ndhD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_ORYSA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oryza sativa GN=ndhD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_ORYNI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oryza nivara GN=ndhD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 245 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 283
BLAST of CB322198 vs. ExPASy Swiss-Prot
Match: NU4C_LOLPR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lolium perenne GN=ndhD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.589e-14 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 TCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIV 117 TCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+ Sbjct: 247 TCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVII 285 The following BLAST results are available for this feature:
BLAST of CB322198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322198 ID=CB322198; Name=CB322198; organism=Citrus sinensis; type=EST; length=119bpback to top |