CB322206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.852e-15 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSEQRK 173 FKHSNFSSF+RQLN YGFRK+D DRWEF + F+R Q HLL I RR + G +RK Sbjct: 58 FKHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKRK 114
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFA7B_ARATH (Heat stress transcription factor A-7b OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.497e-14 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQ 302 FKH+NFSSF+RQLN YGFRKI+ +RWEF+N+GF+ Q+ LL +I RR ++ Q + +P E+ L+ ++ L E+ LRQ Sbjct: 72 FKHNNFSSFVRQLNTYGFRKIEAERWEFMNEGFLMGQRDLLKSIKRRTSSSSPPSLNYSQSQPEAHDP---------GVELPQLREERHVLMMEISTLRQ 162
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSEQRKS 176 FKH+NFSSF+RQLN YGFRKI DRWEF N+ F R +KHLL I RRK +Q Q+ S Sbjct: 78 FKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHS 135
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNT---------------------QGSEQRKSLQQSEKLVEPCEKI--DHSALWKEVENLKAGKNALTQELLKLRQ 302 FKH NFSSF+RQLN YGFRK+ DRWEF ++ F+R Q HLL I RRK Q + S+ S + + E + +AL++EV+ L+ + A+ +EL ++ Q Sbjct: 70 FKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRKKRGEGGGGGGGASCSFGGGAGEHQVAAAAASVGMSGEEEDAAEDVLAKEAALFEEVQRLRHEQTAIGEELARMSQ 192
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.259e-14 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRR 143 FKH+NFSSF+RQLN YGFRK+D DRWEF + F+R Q HLL NI RR Sbjct: 55 FKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRR 101
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.562e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNT 152 FKHSNFSSF+RQLN YGF+K+ DRWEF ND F R +KHLL I RRK + Sbjct: 54 FKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKGS 103
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.618e-13 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSE 164 FKH+NFSSF+RQLN YGFRKI DRWEF N+ F + KHLL+ I RRK++ S+ Sbjct: 80 FKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQ 133
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.114e-13 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQ 155 FKH+NFSSF+RQLN YGFRKI DRWEF N+ F + KHLL I RRK++Q Sbjct: 78 FKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQ 128
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSEQ--RKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQEL 287 FKH NF+SF+RQLN YGFRK+D DRWEF ++ F+R Q LL I R+K G+ R+ ++ E++ E + L +E ++ A+ Q L Sbjct: 68 FKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKKKKGGAAPGCRELCEEGEEVRGTIEAVQR--LREEQRGMEEELQAMDQRL 162
BLAST of CB322206 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 43/100 (43.00%), Postives = 51/100 (51.00%), Query Frame = 3 Query: 3 FKHSNFSSFIRQLNIYGFRKIDTDRWEFVNDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQ 302 FKHSNFSSFIRQLN YGFRKI+ +RWEF N+ F+ Q+ LL NI RR P H A L+ K L E++ LRQ Sbjct: 73 FKHSNFSSFIRQLNTYGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNP----------------FTPSSSPSHDA----CNELRREKQVLMMEIVSLRQ 152 The following BLAST results are available for this feature:
BLAST of CB322206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322206 ID=CB322206; Name=CB322206; organism=Citrus sinensis; type=EST; length=302bpback to top |