CB322214

Overview
NameCB322214
Unique NameCB322214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length246
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.476e-14
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M+ +VGNRLP+F+KE+ +MVKG+ DF+G+N Y + Y  +          Y  D +A     +NG+PIGP+A S+W Y
Sbjct:  335 PLSMRELVGNRLPEFSKEQSEMVKGAFDFIGLNYYASSYADNDPPSYGHNNSYNTDSHAKITGSRNGIPIGPQAASFWFY 414          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.224e-14
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M+ +VGNRLP+F+KE+  MVKG+ DF+G+N YT+ Y  +          Y  D +A     +NG+PIGP+A S+W +
Sbjct:  312 PLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFH 391          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.409e-14
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M+ +V NRLP+FTKE+ +++KGS DF+G+N YT+ Y             Y  D  A     +NG+PIGP+A S WLY
Sbjct:  308 PLSMRELVRNRLPQFTKEQSELIKGSFDFIGLNYYTSNYAGSLPPSNGLNNSYSTDARANLTAVRNGIPIGPQAASPWLY 387          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGLS_TRIRP (Non-cyanogenic beta-glucosidase OS=Trifolium repens PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.605e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 3
Query:    6 KTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            K+M+ IV NRLPKF+K E  +V GS DF+GIN Y++ Y+ +       +  Y  +     ++EK+G+P+GPRA S W+Y
Sbjct:  313 KSMRRIVKNRLPKFSKFESSLVNGSFDFIGINYYSSSYISNAPSHGNAKPSYSTNPMTNISFEKHGIPLGPRAASIWIY 391          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL39_ARATH (Putative myrosinase 3 OS=Arabidopsis thaliana GN=TGG3 PE=5 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.359e-12
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGP--RANSYW 236
            P  M+ +VG RLPKF K+E K+VKGS DF+GIN Y   Y+Y      P ++    D  + F+YE    PIGP   A+SY+
Sbjct:  282 PDIMRKLVGRRLPKFNKKEAKLVKGSYDFLGINYYQTQYVYAIPANPPNRLTVLNDSLSAFSYENKDGPIGPWFNADSYY 361          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.953e-12
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQV--GYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P TM++ VG+RLPKFT++E  +V GS+DF+GIN YT +Y  D      +++      D        +NG PIG RANS WLY
Sbjct:  308 PATMRSRVGSRLPKFTEKEAALVNGSLDFMGINHYTTFYTKDDQSTVIEKLLNNTLADTATISVPFRNGQPIGDRANSIWLY 389          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.502e-11
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPR 221
            P TM+  +GNRLP+FT E+  MVKGS DF+G+N YT YY          ++ Y  D  A     +NG PIGP+
Sbjct:  304 PGTMRGWLGNRLPEFTPEQSAMVKGSYDFIGVNYYTTYYAKSIPPPNSNELSYDLDNRANTTGFRNGKPIGPQ 376          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.502e-11
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMY--DPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P TM+  VG RLP+FT +E  +VKG++DFVGIN YT YY    + ++          D        KNG PIG RANS WLY
Sbjct:  320 PATMRARVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLY 401          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.371e-11
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPR 221
            P TM+  +G+RLPKFT  +  MVKGS DF+GIN YT YY          ++ Y  D  A     +NG PIGP+
Sbjct:  310 PGTMRGWLGDRLPKFTPAQSAMVKGSYDFIGINYYTTYYAKSVPPPNSNELSYDVDSRANTTGFRNGKPIGPQ 382          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.371e-11
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQV--GYQQD-WNAGFAYEKNGVPIGPRA 224
            P TM+ +VG+RLPKFT E+ ++VKGS DF+G+N YT  Y     L++P ++   Y  D W    AY +NGVPIGP A
Sbjct:  301 PGTMRKLVGDRLPKFTAEQSELVKGSYDFIGLNYYTTNYAKSV-LRRPSKLKPAYATDNWVNQTAY-RNGVPIGPPA 375          
The following BLAST results are available for this feature:
BLAST of CB322214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BGL10_ORYSJ2.476e-1442.50Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]
BGL11_ORYSJ4.224e-1442.50Beta-glucosidase 11 OS=Oryza sativa subsp. japonic... [more]
BGL13_ORYSJ9.409e-1443.75Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGLS_TRIRP1.605e-1343.04Non-cyanogenic beta-glucosidase OS=Trifolium repen... [more]
BGL39_ARATH1.359e-1245.00Putative myrosinase 3 OS=Arabidopsis thaliana GN=T... [more]
BGL34_ORYSJ3.953e-1245.12Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL30_ORYSJ1.502e-1145.21Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL06_ORYSJ1.502e-1146.34Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL35_ORYSJ4.371e-1145.21Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]
BGL27_ORYSJ4.371e-1149.35Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionEST0338 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB354 similar to beta-mannosidase (acc# AAL37719), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322214 ID=CB322214; Name=CB322214; organism=Citrus sinensis; type=EST; length=246bp
ACCCAAAAACAATGCAAAACATTGTTGGCAACAGGCTACCCAAGTTCACA
AAAGAAGAGGTTAAAATGGTAAAGGGATCAATAGATTTTGTGGGTATTAA
CCAGTATACTGCCTACTACATGTATGATCCGCATTTGAAACAACCAAAGC
AAGTGGGATATCAGCAGGATTGGAATGCTGGATTTGCTTATGAAAAGAAT
GGAGTGCCAATTGGTCCAAGAGCAAATTCTTATTGGCTATACAATG
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