CB322217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.579e-14 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YW +PV+W LYGL+T Q GDL+ + + DG T V F+ D++ F+ DF+ VV+ M + +F VFA AIK +NFQRR Sbjct: 1370 YWANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAV-DFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.579e-14 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YWL PVAW LYGL+ Q GD+ + D N M+VKQFI + Y +++ F+ VV+ M++++ +F +FA IK+ NFQ+R Sbjct: 1347 YWLCPVAWTLYGLIASQFGDITE--PMADSN---MSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.243e-13 Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YWL P+AW +YGL+ Q GDLE ++ +P +N T+ ++ ++ + + F+PVV+ + +++ F F++A IK +NFQ R Sbjct: 1421 YWLCPLAWTVYGLIVTQYGDLEQIISVPGQSN--QTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.623e-13 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YW+ PVAW +YGL+ Q GD+E +++P G T+K +IE++Y + DF+ ++ + + + F F+FA+ I+ +NFQ+R Sbjct: 1336 YWICPVAWTVYGLIVSQYGDVEDTIKVP-GMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.120e-13 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YW PVAW LYGLV Q G+ + D TVK F+ F+ DF+PVV +M +V+ +F +FA++IK +NFQRR Sbjct: 1365 YWACPVAWTLYGLVVSQFGEYTDTMSDVDE-----TVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.616e-13 Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 3 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 YWL PVAW +YGL+ Q GD+E + +P + V+ FI+D + + DF+ VV+ + + F F +AY+I+ +NFQ+R Sbjct: 1430 YWLCPVAWTVYGLIVSQYGDVEDFITVP--GQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.222e-12 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 6 WLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 W+ PVAW LYGLV Q GD+ + + DG VK F+E+ +DFK ++ VV+++ + + +F F+F +AI +NFQ+R Sbjct: 1390 WICPVAWTLYGLVASQFGDI--MTPMDDGT----PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CB322217 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.541e-11 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 6 WLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 248 W+ PVAW LYGL+ Q GD+ + + DG + V F+E+ +DFK ++ V+++ + + +F F+F +AI +NFQ+R Sbjct: 1394 WICPVAWTLYGLIVSQYGDI--VTPMDDG----IPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468 The following BLAST results are available for this feature:
BLAST of CB322217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322217 ID=CB322217; Name=CB322217; organism=Citrus sinensis; type=EST; length=329bpback to top |