CB417295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NDUV2_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Dictyostelium discoideum GN=ndufv2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 8.921e-30 Identity = 59/114 (51.75%), Postives = 87/114 (76.32%), Query Frame = 2 Query: 110 QASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCM 451 Q++ + S AL+ H+++ DNN P+ F+ N KV++IL+ YP Y+QSA+IPLLDLAQ+Q+GGW+ + AM++VA I +AP+ YEVA+FY+MFNR+K+G+ + VC TTPCM Sbjct: 28 QSTLTRSDALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQRQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCM 141
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE_RICFE (NADH-quinone oxidoreductase subunit E OS=Rickettsia felis GN=nuoE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23 Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 F N ++I+ YP + K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++E+ +R YEVATFYSMFN +VGKYH+ VC TTPC Sbjct: 7 FDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYSMFNLKRVGKYHIQVCTTTPC 93
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE_RICTY (NADH-quinone oxidoreductase subunit E OS=Rickettsia typhi GN=nuoE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.128e-23 Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 F N + I+ YP N K+SA++PLLDLAQ+Q+GGWL +SA+ VA ++E+ +R YEVATFYSMFN S VGKYH+ VC TTPC Sbjct: 12 FDKKNLNLAETIIKKYPPNGKRSAILPLLDLAQRQNGGWLHISAIEYVANMLEMPYMRAYEVATFYSMFNLSPVGKYHIQVCTTTPC 98
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE_RICCN (NADH-quinone oxidoreductase subunit E OS=Rickettsia conorii GN=nuoE PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.780e-23 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 F N +EI+ YP + K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++ + IR YEVATFY+MFN +VGKYH+ VC TTPC Sbjct: 10 FDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLAMPYIRAYEVATFYTMFNLKRVGKYHIQVCTTTPC 96
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE_RICPR (NADH-quinone oxidoreductase subunit E OS=Rickettsia prowazekii GN=nuoE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.242e-22 Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 F N + I+ YP K+SA++PLLDLAQ+Q+GGWL VSA+ VA ++E+ +R YEVATFY+MFN + +GKYH+ VC TTPC Sbjct: 12 FDKKNLNLAETIIKKYPPEGKRSAILPLLDLAQRQNGGWLHVSAIEYVANMLEMPYMRAYEVATFYTMFNLNPIGKYHIQVCTTTPC 98
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE_RICBR (NADH-quinone oxidoreductase subunit E OS=Rickettsia bellii (strain RML369-C) GN=nuoE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.847e-22 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 182 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 + F N ++I+ YP K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++E+ +R YEVATFY+MFN VGK H+ VC TTPC Sbjct: 8 FSFDKKNLSLAEDIIKKYPPEGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYTMFNLKPVGKNHIQVCTTTPC 96
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE1_RHIME (NADH-quinone oxidoreductase subunit E 1 OS=Rhizobium meliloti GN=nuoE1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.023e-14 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVG-KYHLLVCGTTPCM 451 FS N + + YP +QSAVIPLL AQ+Q G W+ +A+ VA ++ +A IRV EVATFY+ F VG + H+ VCGTTPCM Sbjct: 18 FSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRAHVQVCGTTPCM 105
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NUOE2_RHIME (NADH-quinone oxidoreductase subunit E 2 OS=Rhizobium meliloti GN=nuoE2 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12 Identity = 33/85 (38.82%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 197 TNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCM 451 T +E+++ + YP ++SA++P L +AQ++HG LP + EVA+I+ V + VYE+ATFY++F+ +G++HL +C CM Sbjct: 2 TMREEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIGRFHLQLCDNVSCM 83
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NQO2_PARDE (NADH-quinone oxidoreductase chain 2 OS=Paracoccus denitrificans GN=nqo2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 182 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKY-HLLVCGTTPCM 451 ++F+ N E + ++ YP +QSA+IP+L AQ+Q G WL A+ A ++ + IR EVATFY MF VG H+ +CGTT CM Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGSVAHIQICGTTTCM 102
BLAST of CB417295 vs. ExPASy Swiss-Prot
Match: NQO2_THET8 (NADH-quinone oxidoreductase subunit 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo2 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 4.163e-11 Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 188 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPC 448 F D ++ ++E + YP +++A++PLL QQ+ G W+ + E+A+++ P V VA+FYS + GKYHL VC T C Sbjct: 3 FFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEG-WIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVCATLSC 88 The following BLAST results are available for this feature:
BLAST of CB417295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417295 ID=CB417295; Name=CB417295; organism=Citrus sinensis; type=EST; length=452bpback to top |