CB417297

Overview
NameCB417297
Unique NameCB417297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.227e-61
Identity = 67/84 (79.76%), Postives = 78/84 (92.86%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEK 254
            R+VNHFVQEFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PV++
Sbjct:  234 RLVNHFVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRSTLQPVDR 317          

HSP 2 Score: 117.472 bits (293), Expect = 4.227e-61
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  262 DAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            DAK+DKS VH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +             ETAGG+MT LIPRNTTIPTKK +VFST+
Sbjct:  321 DAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTF 430          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.372e-61
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEK 254
            R+VNHFV EFKRK+KKDI GN RALRRLRTACERAKRTLSS++Q ++EIDSLY+GIDFYT+ITRARFEEL  DLF  C+EPVEK
Sbjct:  237 RLVNHFVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEIDSLYDGIDFYTSITRARFEELCSDLFNNCIEPVEK 320          

HSP 2 Score: 114.775 bits (286), Expect = 9.372e-61
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            +D K+DK S+ ++VLVGGSTRIPKVQQL+Q+ FNGKEL KSINPDE           ILSG+ + ++ +             ET GGVMT ++PRNT IP KK Q FST+
Sbjct:  323 KDCKLDKKSIDEIVLVGGSTRIPKVQQLIQNLFNGKELNKSINPDEAVAYGAAVQAAILSGDKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNTIIPCKKTQTFSTH 432          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.604e-60
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  MEPVE+  R
Sbjct:  234 RLVNHFVTEFKRKHKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLR 320          

HSP 2 Score: 113.62 bits (283), Expect = 4.604e-60
Identity = 63/114 (55.26%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R  RDAK+DKSSVH++VLVGGSTRIPK+Q+L+ D+FN KE  KSINPDE           ILSG+ + K   +             ETAGGVMT L+ RNTTIPTKK + FSTY
Sbjct:  317 RVLRDAKIDKSSVHEIVLVGGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTY 429          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.002e-60
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHF  EFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDF+T+ TRARFEE+  DLFR  MEP E+  R
Sbjct:  234 RLVNHFSNEFKRKHKKDLSDNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFFTSNTRARFEEVGQDLFRGNMEPGERTLR 320          

HSP 2 Score: 122.094 bits (305), Expect = 6.002e-60
Identity = 65/114 (57.02%), Postives = 76/114 (66.67%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R  RD K+DKSSVH++VL GGSTRIPKVQ+L+ DFFNGKE CKSINPDE           ILSG+ + K  ++             ETAGGVMT LI RNTTIPTKK + FST+
Sbjct:  317 RTLRDDKIDKSSVHEIVLGGGSTRIPKVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILSGDTSSKSTKEILLLDVAPLSLGIETAGGVMTALIKRNTTIPTKKSETFSTF 430          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.014e-60
Identity = 69/87 (79.31%), Postives = 77/87 (88.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFV EFKRK+KKD++ N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  MEPVE+  R
Sbjct:  104 RLVNHFVNEFKRKHKKDLTTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLR 190          

HSP 2 Score: 114.005 bits (284), Expect = 6.014e-60
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R  RDAK+DKSSVH++VLVGGSTRIPK+Q+L+ DFFN K+  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTKK + FSTY
Sbjct:  187 RVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTY 299          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 6.038e-60
Identity = 68/110 (61.82%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R AKMDK+ VHD+VLVGGSTRIPKVQ+LL DFF+GKEL KSINPDE           ILSG+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TY
Sbjct:   79 RVAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTY 188          

HSP 2 Score: 124.405 bits (311), Expect = 6.038e-60
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 3
Query:   27 EFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            EFKR +KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT ITRARFEEL  DLFR  M+PVEK  R
Sbjct:    1 EFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALR 79          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.020e-59
Identity = 69/111 (62.16%), Postives = 76/111 (68.47%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE  KSINPDE           ILSG + ++K+QD             ETAGGVMT LI RNTT+PTKK Q FSTY
Sbjct:  324 RDAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDLLLLDVTPLSLGLETAGGVMTTLIARNTTVPTKKSQTFSTY 434          

HSP 2 Score: 123.635 bits (309), Expect = 1.020e-59
Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPV 248
            R+V+HF QEFKRK++KDI+ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARFE++  D FRK MEPV
Sbjct:  238 RLVDHFTQEFKRKHRKDITENQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPV 319          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.020e-59
Identity = 62/84 (73.81%), Postives = 75/84 (89.29%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEK 254
            R+VNHF +EFKRK+K DI GN RALRRLRTACERAKRTLSS+ + ++EID+L+EGIDFY+ I+RARFEELNMDLFR  M+PVE+
Sbjct:  237 RLVNHFAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVER 320          

HSP 2 Score: 118.242 bits (295), Expect = 1.020e-59
Identity = 60/113 (53.10%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R   DAKMDK ++HDVVLVGGSTRIPK+Q+LLQD F GK+L  SINPDE           IL+G G+ ++QD             ETAGGVMT L+ RN  IP K++Q+F+TY
Sbjct:  320 RALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTY 432          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.948e-59
Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEK 254
            RMV HFV+EFKRK+KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK
Sbjct:  235 RMVGHFVEEFKRKHKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEK 318          

HSP 2 Score: 122.094 bits (305), Expect = 2.948e-59
Identity = 64/109 (58.72%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  262 DAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ Q+FSTY
Sbjct:  322 DAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTY 430          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.534e-59
Identity = 62/82 (75.61%), Postives = 73/82 (89.02%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPV 248
            R+VNHFV EFKRK+KKDIS N RALRRLRTACERAKRTLS++ Q ++EIDSL++GIDFYT+ITRARFEEL +DLFR  + PV
Sbjct:  236 RLVNHFVDEFKRKHKKDISSNKRALRRLRTACERAKRTLSASTQASVEIDSLFDGIDFYTSITRARFEELCIDLFRGTLGPV 317          

HSP 2 Score: 120.168 bits (300), Expect = 6.534e-59
Identity = 63/113 (55.75%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            +N+      KS +H+VVLVGGSTRIPKVQ LLQ+FFNGKEL KSINPDE           IL+G+ +E VQD             ETAGGV T LI RNTT+PTK  QVF+TY
Sbjct:  326 KNSSGQNFSKSDIHEVVLVGGSTRIPKVQSLLQEFFNGKELNKSINPDEAVAYGAAVQAAILAGDKHEAVQDLLLLDVAPLSLGIETAGGVFTPLIKRNTTVPTKYSQVFTTY 438          
The following BLAST results are available for this feature:
BLAST of CB417297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_NEUCR4.227e-6179.76Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HS7C3_DICDI9.372e-6179.76Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_EMENI4.604e-6080.46Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_CLAHE6.002e-6074.71Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_PENCI6.014e-6079.31Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_ONCVO6.038e-6061.82Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP70_BRELC1.020e-5962.16Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP7B_DROME1.020e-5973.81Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP74_ANOAL2.948e-5973.81Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_HYDMA6.534e-5975.61Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]

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Properties
Property NameValue
Genbank descriptionEST0370 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P015 similar to 70 kDa heat shock protein (acc# AAL24367), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417297 ID=CB417297; Name=CB417297; organism=Citrus sinensis; type=EST; length=590bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACCGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGGTT
CTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAGGA
CTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGCGG
TTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTAAT
GAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGG
TTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCA
CTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTC
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