CB417301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 1.247e-42 Identity = 73/117 (62.39%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCEN--DSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFN+GL+CG CY++ C+ D WC PG S+ +TATNFCPPN L +D+GGWCNPP HFDMA+PA+ +I YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG Sbjct: 74 TALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAG 190
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 1.628e-42 Identity = 74/117 (63.25%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFN+G SCG CY++ C+ +WC PG ++ VTATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G Sbjct: 90 TALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTG 206
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 2.777e-42 Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFN+G SCG CY++ C+ +WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G Sbjct: 92 TALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTG 208
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.737e-42 Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 T LF G CG+CYE+KC + C G+ ++VTATN CPPN SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+V+NVGGAGD Sbjct: 82 TPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGD 198
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.080e-42 Identity = 74/121 (61.16%), Postives = 98/121 (80.99%), Query Frame = 1 Query: 7 LFNNGLSCGSCYEMKCEN----DSKWCLPG----SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 +F +GLSCG+C+E++C D + CLP SI+VTAT+ CP N AL D GGWCNPPL HFD+++PAFL+IA++++GIVP+S+RR+ C +KGG+RFT+NGHSYFNLVLV+NVGGAGD Sbjct: 72 MFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGD 192
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.378e-41 Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFN+G SCG CY++ C+ +WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YF LVLVTNV AG Sbjct: 79 TALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAG 195
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 1.800e-41 Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFN+G SCG CY++ C+ +WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G Sbjct: 74 TALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTG 190
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCEN--DSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 T LFN+G SCG CY + C+ D ++C+ G S+ +TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I Y GIVP+ ++R+PCAK+GG+RFT+NG YF LVLV+NVGG G Sbjct: 74 TVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVG 190
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 69/114 (60.53%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALFNNG CG+CYE+ CE+ +WCLPGSI +TATNFCPP+ NDN WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L NVGGAG Sbjct: 130 TALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAG 241
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 72/118 (61.02%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALFN+G SCG CY++ C+ +WCL G SI +TATNFCPPN A ++DNGGWCNPP HFDMA+PAFL IA+Y+AGIVPI ++++ C + GG+RFT+NG +YF LVL++NV G G+ Sbjct: 68 TALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGE 185 The following BLAST results are available for this feature:
BLAST of CB417301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417301 ID=CB417301; Name=CB417301; organism=Citrus sinensis; type=EST; length=346bpback to top |