CB417301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.167e-40 Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCE-NDSKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 +ALFN+G CG+CY + C+ + +KWC PG SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+ IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV VTNVGG+G Sbjct: 68 SALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSG 184
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.524e-40 Identity = 69/116 (59.48%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCE-NDSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 +ALFN+G +CG CY++ C+ ++SKWC G S+ +TATN CPP+ + +++GGWCNPP QHFDMA+PA+ QI YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVL+TNVGG G Sbjct: 64 SALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPG 179
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 1.990e-40 Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCEN--DSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 TALF++G SCG CY + C+ D +WC G S+ VTATNFCPPN AL +D+GGWCNPP HFDMA+PA+ +I YR GIVP++FRR+PC ++GG+RFTV G YF LVLVTNV AG Sbjct: 74 TALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAG 190
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 3.395e-40 Identity = 68/117 (58.12%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDS--KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 +ALFN+G SCG CY++ C++ + +WCL G ++ +T TN CPPN ALS+++GGWCNPP HFDMAEPA+LQI Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVL++NV G+G Sbjct: 72 SALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSG 188
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.877e-40 Identity = 71/116 (61.21%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALF+ GLSCG+C+E+ C ND +WC+ G SI+VTATNFCPP GG C+PP HFD+++P + +IA Y++GI+P+ +RR+ C + GGIRFT+NGHSYFNLVLVTNVGGAGD Sbjct: 78 TALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGD 185
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.685e-39 Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALFN G +CG+CY++ C ND +WCLPGS+ +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD Sbjct: 88 TALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGD 200
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.200e-39 Identity = 70/116 (60.34%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCE-NDSKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAG 342 +ALFN+G CG+CY + C+ + S WC PG SI +TATN CPPN A +D GGWCNPP +HFDM++PA+ IA Y+AGIVP++F+R+PC K GGIRFT++G YF LV V NVGG+G Sbjct: 63 SALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSG 178
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.362e-39 Identity = 66/115 (57.39%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALFN+G +CG+CYE+ C D +WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VL+ NVGGAGD Sbjct: 98 TALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGD 210
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.362e-39 Identity = 66/115 (57.39%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALFN+G +CG+CYE+ C D +WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VL+ NVGGAGD Sbjct: 92 TALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGD 204
BLAST of CB417301 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38 Identity = 66/115 (57.39%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDSKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGD 345 TALFN G +CG+CY++ C +D +WCLPG+I +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD Sbjct: 95 TALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGD 207 The following BLAST results are available for this feature:
BLAST of CB417301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417301 ID=CB417301; Name=CB417301; organism=Citrus sinensis; type=EST; length=346bpback to top |