CB417302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWH-RVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544 +A A T D KE P ++VF D+PGL+ D L ISG+R E E+K + R+ER G R+F LPENA ++I A ++GVLTVTV + R I++ Sbjct: 38 DAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEV 152
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 2 Query: 203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNI----EKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544 +A A T D K+ P A+ F D+PGL+ ++R L ISG+R E++++S + R+ER G F R+F LP+NA +D+I A ++GVLTVTV K + + I++ Sbjct: 46 DARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 206 ASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISG---QRNIEKE---DKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQIS 547 ASA +DW ETP +HV + ++PGL D L + G EKE +K WH ER F+R LP ++++I+AS++NGVLTV VPK + R I +S Sbjct: 24 ASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544 +A A T D KE A+ F D+PGL D+R L ISG+R E+ + + + R+ER G F R+F LP+NA +D++ A +GVLTVTV K + + I+I Sbjct: 39 DARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREEREDAK-YLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEI 151
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 230 VDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQI--------------SGQRNIEKEDKSD--TWHRVERSSGMFSR---RFRLPENAKMDRIKASMENGVLTVTVPKAEEAKK 520 +DW+ETP AHVF+ DLPGL D L++ +G+ + E+E+++D WH ER++G +FRLPE+A D A M +GVLTVTVPK + K+ Sbjct: 29 MDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPKRKGKKR 144
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSPC2_RICFE (Small heat shock protein C2 OS=Rickettsia felis GN=hspC2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 2 Query: 227 RVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 R D ET + + +LPG+ D+ L I GQ+ + E+K+ +H ER G F R LP N D I A ENG+L +T+PK E+ K R I++ G Sbjct: 51 RTDISETDSGYSLEVELPGINQKDIDINI-DNHILTIKGQKEEKSEEKNKNYHMRERYYGSFQRSISLPANINDDAINARFENGILHITIPKKEQGK---TRKIEVKG 154
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP19_ORYSJ (19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 46/122 (37.70%), Postives = 62/122 (50.82%), Query Frame = 2 Query: 212 AFVNTRVDWKE--TPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSD-----TWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPK--AEEAKKANVRAIQISG 550 A NT +D KE A V D+PG+ D L ISG+R D D + R+ER G F RRF LPE+A +D ++A ++GVLTVTV K E KK V ++++G Sbjct: 45 AMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVLTVTVDKKPPPEPKKPRVVEVKVAG 166 The following BLAST results are available for this feature:
BLAST of CB417302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417302 ID=CB417302; Name=CB417302; organism=Citrus sinensis; type=EST; length=730bpback to top |