CB417303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_POLSQ (Alanyl-tRNA synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG TRA QKCIRAGGKHNDLD+VG HHTFFEMLGN+SFGDYFK +AI++ W+LLT+V+ LP D+L T + D++A Sbjct: 46 KDVFLGF-----DKRSYTRATTAQKCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIQFAWDLLTQVFELPKDKLLVTVYAEDDEA 135
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_IDILO (Alanyl-tRNA synthetase OS=Idiomarina loihiensis GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT + +A + Q+C+RAGGKHNDL++VG HHTFFEM+GN+SFGDYFK +AI++ W+ LTK +LPA++L+ T F D+EA DIW+K Sbjct: 48 KDVFLGT-----DKRRYDKATSAQRCLRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKKQAIQYAWDFLTKELKLPAEKLWVTVF--------TEDDEAYDIWVK 143
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_FRATN (Alanyl-tRNA synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL 335 K +FLG + +RA QKC+RAGGKHNDLD+VG HHTFFEMLGN+SFGDYFK +AI + WE LTK +LP ++L+ T + A D+EA D+W K + Sbjct: 47 KDVFLGI-----EKKDFSRAVTVQKCLRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAISFAWEFLTKEIKLPIEKLWVTIY--------ASDDEAFDVWHKHI 144
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BURCM (Alanyl-tRNA synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT DP +RA Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI + WELLT VY+LP ++L+ T + D+EA DIW K Sbjct: 46 KDVFLGT-DPRPY----SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKEKLWVTVY--------QEDDEAYDIWAK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BURCA (Alanyl-tRNA synthetase OS=Burkholderia cenocepacia (strain AU 1054) GN=alaS PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT DP +RA Q+ +RAGGKHNDL++VG HH FFEMLGN+SFGDYFK++AI++ WELLT VY+LP D+L+ T + D+EA DIW K Sbjct: 46 KDVFLGT-DPRPY----SRATTAQRSVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLWVTVY--------QEDDEAYDIWAK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BURA4 (Alanyl-tRNA synthetase OS=Burkholderia ambifaria (strain MC40-6) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT DP +RA Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI + WELLT VY+LP ++L+ T + D+EA DIW K Sbjct: 46 KDVFLGT-DPRPY----SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKEKLWVTVY--------QEDDEAYDIWAK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XYLFM (Alanyl-tRNA synthetase OS=Xylella fastidiosa (strain M12) GN=alaS PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.085e-25 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG A+ +++ R + Q C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK EAI W WELLT V+ LP +RL T + D+++ Sbjct: 52 KDVFLG-AEKRSEV----RVADVQCCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKEAITWAWELLTHVWELPPERLLVTVYRTDDES 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XYLFA (Alanyl-tRNA synthetase OS=Xylella fastidiosa GN=alaS PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.085e-25 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG A+ +++ R + Q C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK EAI W WELLT V+ LP +RL T + D+++ Sbjct: 52 KDVFLG-AEKRSEV----RVADVQCCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKEAITWAWELLTHVWELPPERLLVTVYHTDDES 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_SILPO (Alanyl-tRNA synthetase OS=Silicibacter pomeroyi GN=alaS PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.085e-25 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 347 RA QKC+RAGGKHNDLD+VG HHTFFEMLGN+SFGDYFK+EAI + WEL+T+ + +P DRLY T + D+EA +IW K +P SR Sbjct: 60 RATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWELITRDFDIPKDRLYTTVY--------HTDDEAFEIWKKVGVPESR 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_SOLUE (Alanyl-tRNA synthetase OS=Solibacter usitatus (strain Ellin6076) GN=alaS PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.029e-25 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASR 347 K +FLG + RA ++QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI + W+L+TK Y LP ++LY T F D+EA ++W K +P SR Sbjct: 46 KDVFLGQ-----EKRDYVRAASSQKCVRAGGKHNDLENVGYTRRHHTFFEMLGNFSFGDYFKADAIAYAWDLITKDYGLPKEKLYVTVF--------REDDEAEELWQKVTGIPKSR 149 The following BLAST results are available for this feature:
BLAST of CB417303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417303 ID=CB417303; Name=CB417303; organism=Citrus sinensis; type=EST; length=348bpback to top |