CB417303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_SILST (Alanyl-tRNA synthetase OS=Silicibacter sp. (strain TM1040) GN=alaS PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 RA QKC+RAGGKHNDLD+VG HHTFFEMLGN+SFGDYFKNEAI + WEL+T + +P D+LY T + D+EA +IW K Sbjct: 60 RATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVY--------HTDDEAFEIWKK 142
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_HELMI (Alanyl-tRNA synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=alaS PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25 Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA +QKC+RAGGKHNDLD VG+ HHTFFEMLGN+SFGDYFK +AI + WE LT V LP D+LYAT + D++A Sbjct: 48 KDVFLGF-----EKRPYLRATTSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRYAWEFLTDVCGLPKDKLYATVYLDDDEA 137
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BORA1 (Alanyl-tRNA synthetase OS=Bordetella avium (strain 197N) GN=alaS PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 TRA ++Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI + WELLT VY+LP ++L+ T + D+EA DIW K Sbjct: 58 TRATSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWELLTTVYKLPVEKLWVTVY--------QEDDEAYDIWAK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_ACIBL (Alanyl-tRNA synthetase OS=Acidobacteria bacterium (strain Ellin345) GN=alaS PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25 Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKV--YRLPADRLYATYFGGDEKAGLAPDNEARDIWL 326 K +FLG + RA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI + WEL+T Y + D+LYAT F G+ G+ D+EA +WL Sbjct: 60 KDVFLGV-----EKRDYNRATTSQKCVRAGGKHNDLENVGFTNRHHTFFEMLGNFSFGDYFKKDAIAYAWELVTSPDWYGMQQDKLYATIFKGEN--GVPRDDEAYQLWL 162
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_HERA2 (Alanyl-tRNA synthetase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=alaS PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.172e-24 Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASR 347 +RA ++QKC+R GK NDL++VG HHTFFEMLGN+SFGDYFK +AI + WE LT+ L R++ + + GDE+ + D EA D+WL ++PA R Sbjct: 58 SRAVSSQKCLRISGKQNDLENVGPSPRHHTFFEMLGNFSFGDYFKKDAIRFAWEFLTQEIGLDPKRMWVSIYEGDEQ--IPADEEAHDLWLAYMPAER 153
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_VIBHB (Alanyl-tRNA synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=alaS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24 Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASR 347 TRA Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI + WE LT+ +LPADRL T + D+EA DIW K +PA R Sbjct: 60 TRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPADRLLVTVY--------ETDDEAFDIWNKKVGVPADR 151
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_VIBF1 (Alanyl-tRNA synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=alaS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24 Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASR 347 K FLG+ N TRA Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI++ WE LT+ LPADRL T + D+EA +IW K +PA R Sbjct: 48 KDCFLGSEKRN-----YTRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLELPADRLLVTVY--------ETDDEAFEIWNKEMGIPADR 151
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_THIDA (Alanyl-tRNA synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=alaS PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24 Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 323 +RA ++Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI++ WE LT V +LP+++L+ T + A D+EA DIW Sbjct: 58 SRAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWEYLTTVLKLPSEKLWVTVY--------AEDDEAYDIW 139
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_RHOPS (Alanyl-tRNA synthetase OS=Rhodopseudomonas palustris (strain BisB5) GN=alaS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASR 347 RA +QKC+RAGGKHNDLD+VG HHTFFEMLGN+SFGDYFK+ AIE W L+TK Y LP DRL T + + D+EA +W K LP S+ Sbjct: 60 RATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWNLITKEYGLPKDRLLVTVY--------SEDDEAFGLWKKIAGLPESK 150
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_GEOSL (Alanyl-tRNA synthetase OS=Geobacter sulfurreducens GN=alaS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24 Identity = 53/89 (59.55%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 323 RA ++QKC+RAGGKHNDL++VG+ HHTFFEMLGN+SFGDYFK EAI + WE LTK L DRLY T + D+EA DIW Sbjct: 59 RACSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKDLGLDKDRLYVTVY--------TDDDEAADIW 139 The following BLAST results are available for this feature:
BLAST of CB417303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417303 ID=CB417303; Name=CB417303; organism=Citrus sinensis; type=EST; length=348bpback to top |