CB417303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XANC8 (Alanyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=alaS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.893e-28 Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA + Q+C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK +AI W WELLT+V++LPADRL T + DE+A Sbjct: 52 KDVFLGA-----EKRSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPADRLLVTVYHTDEEA 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XANC5 (Alanyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=alaS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.893e-28 Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA + Q+C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK +AI W WELLT+V++LPADRL T + DE+A Sbjct: 52 KDVFLGA-----EKRSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPADRLLVTVYHTDEEA 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XANAC (Alanyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=alaS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.893e-28 Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA + Q+C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK +AI W WELLT+V++LPADRL T + DE+A Sbjct: 52 KDVFLGA-----EKRSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPADRLLVTVYHTDEEA 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_ACIAC (Alanyl-tRNA synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=alaS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.893e-28 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT RA + Q C+RAGGKHNDL++VG HHTFFEMLGNWSFGDYFK ++++W WELLT+VY LP +RL AT + A D+EA DIW K Sbjct: 53 KDVFLGT-----DKRPYVRATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDSLKWAWELLTEVYGLPKERLLATVY--------AEDDEAYDIWTK 148
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_JANMA (Alanyl-tRNA synthetase OS=Janthinobacterium sp. (strain Marseille) GN=alaS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.085e-28 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLG TRA + Q C+RAGGKHNDL++VG HHTFFEMLGNWSFGDYFK +A++W+WELLT+VY LPA++L AT + D+EA DIW K Sbjct: 46 KDVFLGE-----DKRPYTRATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDALKWSWELLTQVYGLPAEKLLATVY--------IEDDEAFDIWTK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_RALME (Alanyl-tRNA synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=alaS PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.641e-28 Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASR 347 K +FLGT RA ++Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK EAI++ WELLTKVY+LPAD+L+ T + A D+EA DIW K +PA R Sbjct: 46 KDVFLGT-----DKRPYVRATSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLPADKLWVTVY--------AEDDEAYDIWAKEVGVPADR 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_METI4 (Alanyl-tRNA synthetase OS=Methylacidiphilum infernorum (isolate V4) GN=alaS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.673e-28 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASR 347 R ++QKC+RAGGKHNDL++VG DTYHHTFFEMLGNWSF DYFK EAI W WELLT+ + P +R+YAT + D EA IW K ++ Sbjct: 61 RIADSQKCLRAGGKHNDLEEVGYDTYHHTFFEMLGNWSFNDYFKEEAIHWAWELLTQKWGFPKERIYATVYKPAPDEPGEFDEEAFRIWFKLFQKAK 157
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_ROSS1 (Alanyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=alaS PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.133e-27 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL 326 TRA QKC+R GKHNDL++VG HHTFFEMLGN+SFGDYFK+EAI WELLTKV+ LP +RL+ T F GD++ + PD+EA +W+ Sbjct: 61 TRATTVQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKSEAIPMAWELLTKVFELPVERLWFTVFEGDDE--VPPDDEAAQLWV 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XANOR (Alanyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=alaS PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.479e-27 Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA + Q+C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK +AI W WELLT++++LP DRL T + DE+A Sbjct: 52 KDVFLGA-----EKRSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQIWKLPTDRLLVTVYHTDEEA 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XANOP (Alanyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=alaS PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.479e-27 Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG + RA + Q+C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK +AI W WELLT++++LP DRL T + DE+A Sbjct: 52 KDVFLGA-----EKRSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQIWKLPTDRLLVTVYHTDEEA 141 The following BLAST results are available for this feature:
BLAST of CB417303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417303 ID=CB417303; Name=CB417303; organism=Citrus sinensis; type=EST; length=348bpback to top |