CB417323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C2_ANGEV (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Angiopteris evecta GN=ndhB2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 41 MKAFHLLLFDGSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 MK F+L L G+ I PEC D SD+K+ PWLY +S T+LV S+ LLF+W+EEP+ +F FQ N+FN IF+ IL+CS LCIPLS++ Sbjct: 1 MKDFNLFLLYGNSILPECILILSLIVTIIIDLISDEKNTPWLYLVSLTALVTSVVILLFQWKEEPVSTFFETFQINSFNNIFRLFILICSLLCIPLSID 99
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C1_ANGEV (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Angiopteris evecta GN=ndhB1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 41 MKAFHLLLFDGSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 MK F+L L G+ I PEC D SD+K+ PWLY +S T+LV S+ LLF+W+EEP+ +F FQ N+FN IF+ IL+CS LCIPLS++ Sbjct: 1 MKDFNLFLLYGNSILPECILILSLIVTIIIDLISDEKNTPWLYLVSLTALVTSVVILLFQWKEEPVSTFFETFQINSFNNIFRLFILICSLLCIPLSID 99
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C_MARPO (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Marchantia polymorpha GN=ndhB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20 Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 71 GSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 GS I PEC D T +KD WLYFIS TSL++SI LLF+++ +P+ISF G+FQT++FN IFQ I+ CS LCIPLS+E Sbjct: 12 GSTILPECILIFSLLIILIIDLTFPKKDTIWLYFISLTSLLISIIILLFQYKTDPIISFLGSFQTDSFNRIFQSFIVFCSILCIPLSIE 100
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C2_ANTFO (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Anthoceros formosae GN=ndhB2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19 Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 50 FHLLLFDGSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 F L DGS I PEC D TS++K WLYFIS TSL++SIT LLF+ +EEP+ SFSG+FQT+ FN IF+ I S LCIPLS+E Sbjct: 5 FGSFLSDGSSILPECILISSLIIILLIDLTSEKKTY-WLYFISLTSLIISITVLLFQLKEEPIFSFSGSFQTDGFNGIFRISIAFSSLLCIPLSME 99
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C1_ANTFO (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Anthoceros formosae GN=ndhB1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19 Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 50 FHLLLFDGSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 F L DGS I PEC D TS++K WLYFIS TSL++SIT LLF+ +EEP+ SFSG+FQT+ FN IF+ I S LCIPLS+E Sbjct: 5 FGSFLSDGSSILPECILISSLIIILLIDLTSEKKTY-WLYFISLTSLIISITVLLFQLKEEPIFSFSGSFQTDGFNGIFRISIAFSSLLCIPLSME 99
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Physcomitrella patens GN=ndhB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.715e-15 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 56 LLLFDGSFIFPECXXXXXXXXXXXXDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 L F + I PEC D KD +FIS SL++SI L+F+ +EEP+ISF GNFQ +NFN+IF+ I LCS LCIPLS++ Sbjct: 7 LSFFYKTTILPECVLIFCLISILILDLILKIKDKNVFFFISLVSLLLSIFILIFQLKEEPVISFLGNFQADNFNKIFRIFIALCSILCIPLSID 100
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C2_PSINU (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Psilotum nudum GN=ndhB2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.991e-15 Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 41 MKAFHLLLFDGSFIFPECXXXXXXXXXXXXD--STSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 MK L S I PEC D S ++ D W Y IS +L +SI LL +W +EP+++FS FQ + FN+IF+F +L+CS LCIPLSV+ Sbjct: 1 MKEIESFLVYSSSILPECILIFSSIGILSIDLLSLPNEGDTFWSYSISLAALAISIIILLLQWNKEPVLTFSETFQISRFNDIFRFFLLICSFLCIPLSVD 101
BLAST of CB417323 vs. ExPASy Swiss-Prot
Match: NU2C1_PSINU (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Psilotum nudum GN=ndhB1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.991e-15 Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 41 MKAFHLLLFDGSFIFPECXXXXXXXXXXXXD--STSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 337 MK L S I PEC D S ++ D W Y IS +L +SI LL +W +EP+++FS FQ + FN+IF+F +L+CS LCIPLSV+ Sbjct: 1 MKEIESFLVYSSSILPECILIFSSIGILSIDLLSLPNEGDTFWSYSISLAALAISIIILLLQWNKEPVLTFSETFQISRFNDIFRFFLLICSFLCIPLSVD 101 The following BLAST results are available for this feature:
BLAST of CB417323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417323 ID=CB417323; Name=CB417323; organism=Citrus sinensis; type=EST; length=337bpback to top |