CB417328

Overview
NameCB417328
Unique NameCB417328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5269 contig Csv1_Contig5269:212..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAW (Aconitate hydratase OS=Staphylococcus aureus (strain MW2) GN=acnA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAR (Aconitate hydratase OS=Staphylococcus aureus (strain MRSA252) GN=acnA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAM (Aconitate hydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acnA PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_STAAC (Aconitate hydratase OS=Staphylococcus aureus (strain COL) GN=acnA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRN 392
            K +G   V+LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A++ GL G E  ++++  +V   +P   V+V           F  ++RFD+ VE+ Y+ HGGILQ V+RN
Sbjct:  767 KEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV---QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.201e-29
Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 3
Query:   24 VILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKS----FTCVIRFDTEVELAYFDHGGILQYVIRNLI 398
            V+L G EYGSGSSRDWAAKG  LLGV+AVIA+SFERIHRSNL+GMG+IPL F  G+ A+  GL G E + I     +++ +  + V V      S    F  V+R DT  E  Y+ +GGILQYV+RN++
Sbjct:  830 VVLGGKEYGSGSSRDWAAKGTRLLGVRAVIAESFERIHRSNLIGMGVIPLQFPDGKSAKDLGLDGTEVFDITGIEELNKGKTPKTVHVKASKNGSDAAEFDAVVRIDTPGEADYYRNGGILQYVLRNML 958          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGK----SFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K  G   V+L G EYG+GSSRDWAAKG  LLG++AVI +SFERIHRSNL+GMG++PL F  GE  E+ GL G E + I    +++E    + V+V           F  V+R DT  E  Y+ HGGILQYV+R +
Sbjct:  800 KAAGIPLVVLGGKEYGTGSSRDWAAKGTNLLGIRAVITESFERIHRSNLIGMGVVPLQFPAGESHESLGLDGTETFDITGLTALNEGETPKTVKVTATKENGDVVEFDAVVRIDTPGEADYYRHGGILQYVLRQM 934          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.872e-29
Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRV-----ATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ*FRKNQ 428
            K +G   VILAG EYG+GSSRDWAAKG  LLGVKAVIA+S+ERIHRSNLVGMG++PL +  G++A+T GL G E + I    +++ I+P Q V V      T    +F  + R D +V++ Y  +GGILQ V+++++  ++  +  Q
Sbjct:  762 KEKGIPLVILAGKEYGTGSSRDWAAKGTFLLGVKAVIAESYERIHRSNLVGMGVLPLEYVNGQNAKTLGLDGTEMFNI---KNLNNIKPRQIVIVEAVHPKTAHTTTFEALARLDADVDVDYLKNGGILQTVLKDIMGDKKESKSTQ 905          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACON1_PSEAE (Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN=acnA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.872e-29
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQ--DVRVATDSGK--SFTCVIRFDTEVELAYFDHGGILQYVIRNLI 398
            + +G   VI+AG EYG+GSSRDWAAKG  LLGVKAVIA+SFERIHRSNLVGMG++PL F+ G+D ++  LTG E   +++     E++P     V V  + G   SF  + R DT  E+ YF  GGIL YV+R+++
Sbjct:  777 QEDGTPLVIVAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFENGQDRKSLKLTGKE--VLNIRGLGGELKPHMPLSVEVTREDGSQDSFKVLCRIDTLNEVEYFKAGGILHYVLRSML 910          
The following BLAST results are available for this feature:
BLAST of CB417328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
ACON_STAAW1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAS1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAR1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAM1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAC1.048e-2951.49Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_MYCAV5.201e-2952.71Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_CORGL6.793e-2949.63Aconitate hydratase OS=Corynebacterium glutamicum ... [more]
ACON_FRATH8.872e-2947.62Aconitate hydratase OS=Francisella tularensis subs... [more]
ACON1_PSEAE8.872e-2951.47Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN... [more]

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Properties
Property NameValue
Genbank descriptionEST0405 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P075 similar to aconitase (acc# AAC26045), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417328 ID=CB417328; Name=CB417328; organism=Citrus sinensis; type=EST; length=607bp
ACAAGAATGAGGGGCACGATACTGTTATTTTAGCTGGTGCTGAGTATGGC
AGTGGAAGTTCTCGTGATTGGGCTGCTAAGGGTCCAATGTTGCTGGGTGT
GAAAGCGGTGATTGCAAAAAGCTTTGAGCGAATTCACCGTAGTAATTTGG
TGGGTATGGGCATAATCCCGTTGTGTTTCAAGCCTGGTGAGGATGCCGAG
ACTCATGGGTTGACTGGCCATGAACGCTACACCATTGACCTTCCAAACAG
TGTGAGTGAAATTAGACCTGGTCAGGATGTCAGAGTGGCCACAGACAGTG
GCAAGTCATTCACATGCGTTATAAGATTTGATACAGAGGTGGAATTGGCT
TACTTTGATCATGGAGGCATACTGCAATATGTCATAAGAAACTTGATCAA
TGTGAGACAATGATTCCGCAAGAACCAACTGGTGCTCTTCAACCGGGGTC
TACTTCTTCATTGCTTTAACGCTTTAGCAGATTCAGCCGACGTCCATGAA
TAAATTACGGAACTAAGTTTAGAAATTTCTGTTTTTTGCAGTCATTTTGA
ATTACATTTTTATATCGAGAGCTTTGATAAACAATAGGACACGCCCTAGA
CATGAAT
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