CB417332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 513 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 P V++ D+G +E +K+RE+VE PM HPE F +LGIDPPKG+L YGPPGTGKTLLARA+AN A FI V G E+ Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEI 282 HSP 2 Score: 92.0485 bits (227), Expect = 3.508e-18 Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 474 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 I PS+ E P V +ND+GG +++RE VE P+ PE F K G+ PPKG+L +GPPGTGKT+LA+AVA + A FI V G E+ Sbjct: 469 IQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEI 557
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 516 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +V Y+D+GGC++Q+ ++RE+VELP+ HP+ F +GI PP+GVL YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEV 284 HSP 2 Score: 99.7525 bits (247), Expect = 1.682e-20 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 477 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +PS TV E +VT++DVGG E E+++E VE P+LHP+++ K G+ P KGVL YGPPGTGKTLLA+AVA A FI V G EL Sbjct: 470 NPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPEL 557
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 3 Query: 516 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +V Y+D+GGC+ Q+ ++RE+VELP+ HP+ F +GI PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEI 294 HSP 2 Score: 96.6709 bits (239), Expect = 1.424e-19 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 3 Query: 477 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +PS TV E P+V + D+GG +E ++RE V++P+++ EKF++ G+ P KGVL +GPPGTGKTLLA+A+AN A FI V G EL Sbjct: 480 NPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 567
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: FB58_ARATH (F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20 Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 3 Query: 75 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 290 PLDEDDIAL+KTYGL PYS IKK EKEIK++ +K+NDLCGIKESDTGLA S KQMMQE QPLQV Sbjct: 9 PLDEDDIALVKTYGLVPYSAPIKKVEKEIKELTEKINDLCGIKESDTGLAPLS-------KQMMQEGQPLQV 73
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 97.4413 bits (241), Expect = 8.349e-20 Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++++V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN T A F + G E+ Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274 HSP 2 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 369 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG ++ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 547 The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bpback to top |