CB417332

Overview
NameCB417332
Unique NameCB417332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18
Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  477 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            DP       E   +V Y+D+GG ++Q+ +++E+VELP+ HP+ F  +G+ PP+G+L +GPPGTGKTL+ARAVAN T A F  + G E+
Sbjct:  192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEI 279          

HSP 2 Score: 93.5893 bits (231), Expect = 1.206e-18
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 3
Query:  471 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            K  PS     V E P+ T++D+GG +    +++E+V+ P+ HPEK++K G+ P +GVL YGPPG GKTLLA+A+AN   A FI + G EL
Sbjct:  463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 552          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  378 LGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 698
            L D   P  +  G  + VD  K        PK +  V  + +EE PDV+Y D+GG   QIE++R+ VELP LH E + +  + PPKGVL YGPPG GKTL+A+AVAN
Sbjct:  205 LNDDTRPRKLRPGDSLLVD-TKAGYAFERIPKAE--VEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVAN 308          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  378 LGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 698
            L D   P  +  G  + VD  K        PK +  V  + +EE PDV+Y D+GG   QIE++R+ VELP LH E + +  + PPKGVL YGPPG GKTL+A+AVAN
Sbjct:  205 LNDDTRPRKLRPGDSLLVD-TKAGYAFERIPKAE--VEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVAN 308          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  378 LGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 698
            L D   P  +  G  + VD  K        PK +  V  + +EE PDV+Y D+GG   QIE++R+ VELP LH E + +  + PPKGVL YGPPG GKTL+A+AVAN
Sbjct:  205 LNDDSRPRKLRPGDSLLVDP-KAGYAFERVPKAE--VEDLVLEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLYGPPGCGKTLIAKAVAN 308          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  495 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 698
            + +EE PDV Y+D+GG   QIE++R+ VELP LH + F +  + PPKGVL YGPPG GKTL+A+AVAN
Sbjct:  223 LVLEEVPDVHYDDIGGLGRQIEQIRDAVELPFLHKDLFHEYSLRPPKGVLLYGPPGCGKTLIAKAVAN 290          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 3
Query:  504 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA-CFI 719
            E   D+TY D+GG K+Q+ K+RE++ELP+ +PE F+ +GI  PKGVL +G PGTGKT +A+A+AN ++A C+I
Sbjct:  519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYI 591          

HSP 2 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3
Query:  513 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            P VT+ND+GG  E  E+++E +  P+ +   + K   +  KG+L YGPPG GKTLLA+A+AN   A FI V G EL
Sbjct:  929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  474 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            I PS       + P+V+++D+GG +    K+ + VE P+ HPE F+++GI PPKGVL YGPPG  KT++A+A+AN +   F+ + G EL
Sbjct:  609 IRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697          

HSP 2 Score: 82.8037 bits (203), Expect = 2.128e-15
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  519 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            VTY+ +GG   Q++ +RE++ELP+  PE F   GI  P+GVL YGPPGTGKT++ARAVAN   A    + G E+
Sbjct:  350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEI 423          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 3
Query:  507 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            E P+V ++D+GG +E  +K++E VE P+ H E F +LG+ PPKGVL YGPPG  KT+ A+A+A  T   FI V G EL
Sbjct:  541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPEL 618          

HSP 2 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  519 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 731
            VT++ +GG + QI ++R++VELP  +PE F    I PP+GVL YGPPGTGKT++ RAVA   +A    + G
Sbjct:  276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDG 346          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  474 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            I PS       + P+V+++D+GG +    K+++ VE P+ HP+ F ++GI PPKGVL YGPPG  KT++A+A+AN +   F+ + G EL
Sbjct:  609 IRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697          

HSP 2 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  519 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740
            VTY+ +GG   Q++ +RE++ELP+  PE F   GI  P+G+L YGPPGTGKT++ARAVAN   A    + G E+
Sbjct:  350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEI 423          
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15
Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 3
Query:  501 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737
            +EEKP VT+ DV G +E  E+++E++E  +  P KF KLG  PPKGVL YG PG GKTLLA+A+A      FI V GS+
Sbjct:  146 IEEKPKVTFKDVAGIEEVKEEVKEIIEY-LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSD 223          
The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
TERA2_CAEEL1.206e-1847.73Transitional endoplasmic reticulum ATPase homolog ... [more]
MPA_MYCTU5.983e-1846.73Proteasome-associated ATPase OS=Mycobacterium tube... [more]
MPA_MYCBO5.983e-1846.73Proteasome-associated ATPase OS=Mycobacterium bovi... [more]
MPA_MYCLE1.021e-1746.73Proteasome-associated ATPase OS=Mycobacterium lepr... [more]
MPA_RHOER2.969e-1758.82Proteasome-associated ATPase OS=Rhodococcus erythr... [more]
CDAT_PLAF73.878e-1753.42Putative cell division cycle ATPase OS=Plasmodium ... [more]
SPAT5_HUMAN8.640e-1743.82Spermatogenesis-associated protein 5 OS=Homo sapie... [more]
AFG2_SCHPO4.288e-1651.28ATPase family gene 2 protein OS=Schizosaccharomyce... [more]
SPAT5_MOUSE5.600e-1642.70Spermatogenesis-associated protein 5 OS=Mus muscul... [more]
FTSH_AQUAE2.128e-1553.16Cell division protease ftsH homolog OS=Aquifex aeo... [more]

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Properties
Property NameValue
Genbank descriptionEST0409 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P081 similar to 26S protease regulatory subunit 7 (acc# O64982), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bp
CCAAGCTAGCAAAGGAAAGCAAAGCCATGGCACCGGAGCCGGAAGATGAG
ATCAAGGACGAGAAAAACCCTAGGCCTCTCGATGAAGACGATATCGCTCT
TCTCAAAACCTATGGTTTAGGACCTTATTCTACTAGCATTAAGAAAGCGG
AGAAAGAAATAAAGGATATGGCCAAGAAGGTCAATGACCTGTGTGGTATC
AAGGAGTCTGATACGGGATTAGCTGCACCTAGCCAGTGGGATCTTGTGTC
GGATAAGCAGATGATGCAAGAGGAACAGCCGCTTCAGGTAGCAAGATGCA
CCAAGATAATCAGTCCAAACCCTGAAGATGCCAAATATGTTATAAATGTT
AAGCAGATTGCAAAGTTTGTTGTTGGGCTTGGTGATAAAGTTTCCCCAAC
GGATATAGAAGAGGGCATGCGTGTGGGGGTTGACAGAAATAAATATCAGA
TTCAAATTCCCTTGCCTCCAAAAATTGATCCAAGTGTGACCATGATGACC
GTGGAAGAGAAGCCAGATGTTACATATAATGATGTTGGCGGATGCAAGGA
GCAGATTGAAAAGATGCGAGAAGTTGTTGAGCTACCTATGCTTCATCCTG
AGAAATTTGTAAAGCTTGGAATTGATCCTCCAAAGGGTGTTCTATGCTAT
GGTCCTCCTGGCACTGGTAAAACATTATTAGCCAGAGCTGTAGCTAACAG
AACCGATGCTTGTTTTATTCGTGTGATTGGGAGTGAGCTTG
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