CB417332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32 Identity = 74/166 (44.58%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 243 LVSDKQMMQEEQPLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSEL Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32 Identity = 74/166 (44.58%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 243 LVSDKQMMQEEQPLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSEL Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32 Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = 3 Query: 126 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 YST ++K E ++K+ +K L ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ + LP + D M +EEKPD+ + D+GG QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV+GSEL Sbjct: 7 YSTDVQKNEMDLKEFKEKAY-LAELESKVLRLELKNK-DITRENVQIKKENEILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSEL 218
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.268e-32 Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 126 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV+GSEL Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DVTRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32 Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 126 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV+GSEL Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 3 Query: 144 KAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVS-----------DKQMMQEEQPLQVARCTKIISP--------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 K EKEI D + NDL + + A + ++ + Q+M+E + L+ + P + K V+ F+V + V+P D+ G RV +++ + LP D M V+E+P+V Y D+GG ++Q++++REVVELP+ HPE F K+GI+PPKG+L YGPPGTGKTLLA+AVA T+A FIRV+GSEL Sbjct: 23 KEEKEINDNSNLKNDLLKEELQEKARIAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSEL 240
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32 Identity = 65/139 (46.76%), Postives = 95/139 (68.35%), Query Frame = 3 Query: 324 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +D + ++ +FVV + + + + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSEL Sbjct: 69 DDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSEL 207
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32 Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 126 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV+GSEL Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32 Identity = 80/214 (37.38%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 126 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 YST ++K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV+GSEL Sbjct: 7 YSTDVEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.280e-32 Identity = 66/139 (47.48%), Postives = 95/139 (68.35%), Query Frame = 3 Query: 324 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PPKGVL YGPPG GKTL+A+AVAN +A FIRV+GSEL Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSEL 208 The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bpback to top |