CB417332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.162e-29 Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 PL + ++ N + ++ +F+V V+P DI+ G R +++ I LP D V M + + P Y D+GG KEQI ++RE VELP+ PE F ++GI+PPKGVL YGPPGTGKTLLA+AVA+ T+A F+RV+GSEL Sbjct: 99 PLIIGTVVDVVDAN----RVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSEL 248
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.518e-29 Identity = 85/245 (34.69%), Postives = 129/245 (52.65%), Query Frame = 3 Query: 81 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNPED----------------AKYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +ED +A + T + + ++ + +K+ A++ N C IKE+ +K + ++ P V +I+ NPED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +L Sbjct: 13 EEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQ-------------EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 241
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.983e-29 Identity = 85/245 (34.69%), Postives = 128/245 (52.24%), Query Frame = 3 Query: 81 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNPED----------------AKYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +ED +A + T + + + + +K+ A++ N C IKE+ +K + ++ P V +I+ NPED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +L Sbjct: 13 EEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQ-------------EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 241
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.382e-29 Identity = 87/239 (36.40%), Postives = 129/239 (53.97%), Query Frame = 3 Query: 87 DDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVN-DLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNPED----------------AKYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 D +A + T +G S + + +K+ +++ N DL +KE +Q + +KQ+ P V +I+ +PED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +L Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEK----IKENQEKIKLNKQL-----PYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29 Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 PL + T +I ++++ ++ +F+V + P ++ G+R +++ I LP D + M + E P+ TY ++GG + QIE++RE VELP+ P+ F K+GI PPKGVL YGPPGTGKTLLARAVA++T+A F+RV+GSEL Sbjct: 74 PLVIGTVTDVI----DNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSEL 223
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29 Identity = 68/154 (44.16%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 PL V T II + + V+ +F+V + V+PT ++ G+R +++ I LP D V M + + P TY D+GG ++QI ++RE VELPM P+ F K+GI+PPKGVL YGPPGTGKTLLA+AVA+ T A F+ +GSEL Sbjct: 74 PLIVGTITDII----DSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSEL 223
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29 Identity = 82/243 (33.74%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 81 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQ---MMQEEQPLQVARCTKIISPNPED------AKYVINVKQIAKFVV--------------GLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 D+D +A + T + + + + +KD ++ N L S + + + Q + ++ P V +I+ NPED A ++ ++ K VV GL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H ++F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +L Sbjct: 18 DDDQLASMSTEDIVRATRLLDNETRVLKDELQRTN-----------LEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGL---VDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 246
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 66/154 (42.86%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 PL + T +I N + ++ +F+VG+ ++ +I+ G R +++ I LP D + M V E P Y ++GG ++QI ++RE VELP+ PE F K+GI+PPKGVL +GPPGTGKTLLARAVA++T+A F+RV+GSEL Sbjct: 74 PLVIGTVTDLIDEN----RVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSEL 223
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 3 Query: 243 LVSDKQMMQEEQPLQVARCTKIISPNP---------EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 L +K +Q+E TK++SP +D + V+ +V + V ++ G V ++ I LP + DP V M VEE+P V + DVGG +EQI ++ E V LP+ +P F +LGIDPPKGVL +GPPGTGKTLLA+AVA T+A FIRV+GSEL Sbjct: 35 LTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSEL 209
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203 The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bpback to top |