CB417332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28 Identity = 59/139 (42.45%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 324 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 + ++++ ++VVG + V + + +G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+ +PE F+++GI PPKGVL YGPPGTGKTLLARAVA F++V+ S + Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAI 202
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 61/137 (44.53%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D + ++ VV + + I+ G+ V +++ I LP K DP V M + E+P+VTY+++GG +EQI ++REVVELP+ +PE F ++G++PPKGVL YGPPGTGKT+LA+AVA ++A FI V+ SE Sbjct: 67 DGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 73/201 (36.32%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 150 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLARAVA++ D F++V+ S + Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 73/201 (36.32%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 150 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLARAVA++ D F++V+ S + Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 73/201 (36.32%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 150 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLARAVA++ D F++V+ S + Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203 The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bpback to top |