CB417332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 P+ V +II +D +++ ++ V + V +E G V ++ + + L DP VT+M +E+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKGV+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 737 D K ++ +V + + ++ G V + + I LP + D V V EKP+V Y+D+GG EQI ++REV+ELP+ +PE F ++GIDPPKGVL YGPPGTGKTLLA+AVA ++A FI+V+ SE Sbjct: 67 DGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASE 203
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 63/154 (40.91%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 P+ V +II +D +++ ++ V + V +E G V ++ + + L DP V++M +E+ P TY DVGG +QI++++E VELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+R++GSEL Sbjct: 109 PMAVGSLEEII----DDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSEL 258
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 7.051e-27 Identity = 65/180 (36.11%), Postives = 107/180 (59.44%), Query Frame = 3 Query: 207 SDTGLAAPSQWDLVSDKQMMQEEQ--PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 S++ + P + +K+ ++E + PL + +II +D ++ + + V + V +E G V + I L DP V++M +++ P +Y+D+GG + QI++++E VELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+R++GSEL Sbjct: 77 SNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEII----DDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL 252
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.051e-27 Identity = 71/193 (36.79%), Postives = 111/193 (57.51%), Query Frame = 3 Query: 174 KKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQ----PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 KK+ L ++++ L P + S+ Q EQ PL V + + +D +I ++ V + V +E G V ++ + L ++DP V +M +E+ P TY D+GG +EQI++++E VELP+ +PE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+RV+G+EL Sbjct: 51 KKLAHLLSLEDNILSLCEPDKSSEGSNSQKHVVEQLRGSPLSVGTLEEFV----DDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTEL 239
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.051e-27 Identity = 62/166 (37.35%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 249 SDKQMMQEEQ--PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 +D+++++E + PL V +II N + + + + V + + G V ++ + + ++DP V +M VE+ P +Y+D+GG + Q+++M+E +ELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL Sbjct: 93 ADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIM----SFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSEL 254
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 P+ V ++I N +++ ++ VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL Sbjct: 109 PMSVGNLEELIDENHA----IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSEL 258
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 279 PLQVARCTKIISPNPEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 P+ V ++I N +++ ++ VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL Sbjct: 109 PMSVGNLEELIDENHA----IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSEL 258
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 120.168 bits (300), Expect = 1.203e-26 Identity = 59/131 (45.04%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 327 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFI 719 + KY++ +++VG+ + V + +++G+RV +D I LP + DP V MT E+ ++T++ +GG EQI ++REV+ELP+ +PE F ++GI PPKGVL YGPPGTGKTLLA+AVA A FI Sbjct: 114 EEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI 244
BLAST of CB417332 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.571e-26 Identity = 66/163 (40.49%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 258 QMMQEEQPLQVARC-TKIISPNPEDAKYVINVK-QIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 740 ++ +E + L+ A + PED VI + + L +++ T +E G RV ++ + + +Q L + D M V+E P VTY D+GG +Q+ ++RE VE P+++PEKF +G++PP GVL +GPPGTGKT+LA+AVAN+TDA FI++ GSEL Sbjct: 62 RLQRENETLKTASLYLATVEDLPEDGSAVIKQHGNNQEVLTELSPRLADT-LEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSEL 222 The following BLAST results are available for this feature:
BLAST of CB417332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417332 ID=CB417332; Name=CB417332; organism=Citrus sinensis; type=EST; length=741bpback to top |