CB417339 | Citrus Genome Database

Overview


Name	CB417339
Unique Name	CB417339
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	416

Libraries


Library Name	Type
Mature peel (flavedo) cDNA subtraction library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPS (Enolase OS=Yersinia pseudotuberculosis GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPP (Enolase OS=Yersinia pestis (strain Pestoides F) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPN (Enolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPG (Enolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPE (Enolase OS=Yersinia pestis GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPB (Enolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERPA (Enolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERP3 (Enolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_YERE8 (Enolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426

[Close]

BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_VIBFM (Enolase OS=Vibrio fischeri (strain MJ11) GN=eno PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.002e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2

Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K + + I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG +A + G K
Sbjct:  314 QLVGDDLFVTNTKILAEGIEKGVANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGLK 427

The following BLAST results are available for this feature:

BLAST of CB417339 vs. ExPASy Swiss-Prot

BLAST of CB417339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_YERPS	1.002e-31	57.89	Enolase OS=Yersinia pseudotuberculosis GN=eno PE=3...	[more]
ENO_YERPP	1.002e-31	57.89	Enolase OS=Yersinia pestis (strain Pestoides F) GN...	[more]
ENO_YERPN	1.002e-31	57.89	Enolase OS=Yersinia pestis bv. Antiqua (strain Nep...	[more]
ENO_YERPG	1.002e-31	57.89	Enolase OS=Yersinia pestis bv. Antiqua (strain Ang...	[more]
ENO_YERPE	1.002e-31	57.89	Enolase OS=Yersinia pestis GN=eno PE=3 SV=1	[more]
ENO_YERPB	1.002e-31	57.89	Enolase OS=Yersinia pseudotuberculosis serotype IB...	[more]
ENO_YERPA	1.002e-31	57.89	Enolase OS=Yersinia pestis bv. Antiqua (strain Ant...	[more]
ENO_YERP3	1.002e-31	57.89	Enolase OS=Yersinia pseudotuberculosis serotype O:...	[more]
ENO_YERE8	1.002e-31	57.89	Enolase OS=Yersinia enterocolitica serotype O:8 / ...	[more]
ENO_VIBFM	1.002e-31	57.89	Enolase OS=Vibrio fischeri (strain MJ11) GN=eno PE...	[more]

Pages

Properties


Property Name	Value
Genbank description	EST0417 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P089 similar to enolase (acc# P42896), mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB417339 ID=CB417339; Name=CB417339; organism=Citrus sinensis; type=EST; length=416bp
ACAAATTGTTGGAGATGATCTTTTGGTCACCAATCCTAAGAGGGTTGAGA
AGGCTATCAAAGAGAAGACCTGCAACGCCCTCCTTCTCAAGGTTAATCAA
ATTGGATCTGTAACTGAGAGCATTGAAGCCGTCAGAATGTCCAAGCAAGC
TGGGTGGGGTGTGATGGCCAGCCACCGCAGTGGTGAGACTGAAGATACTT
TCATTGCCGATCTCTCAGTGGGCTTGGCCACGGGTCAAATTAAGACAGGA
GCACCATGCAGGTCAGAGCGCCTTGCAAAGTATAATCAGCTTCTGAGAAT
TGAAGAAGAGCTCGGTGCTGAAGCAGTTTATGCTGGTGCCAAGTTCCGTG
CCCCTGTTGAACCCTACTAGAGTTTGAGATGCTGATCTGGTGTGGTGCTG
GATTTGAGCAATGGAG