CB417339

Overview
NameCB417339
Unique NameCB417339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length416
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9095 contig Csv1_Contig9095:246..661. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_RHOS1 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 70/112 (62.50%), Postives = 87/112 (77.68%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 337
            Q+VGDDL VTNPKR+E+ IK    N++L+KVNQIGS+TE++ AV M+ +A +  + SHRSGETED  IADL+V    GQIKTG+  RS+RLAKYNQL+RIEE LG  A YAG
Sbjct:  308 QLVGDDLFVTNPKRLEQGIKAGVANSMLVKVNQIGSLTETLMAVDMAHRARYTNVMSHRSGETEDATIADLAVATNCGQIKTGSLSRSDRLAKYNQLIRIEEMLGEVAEYAG 419          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_PHOLL (Enolase OS=Photorhabdus luminescens subsp. laumondii GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  314 QLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGNRAPFYGLK 427          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_PECCP (Enolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 343
            Q+VGDDL VTN K +++ I++   N++L+K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  313 QLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDSAPFNGLK 426          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_MYCMO (Enolase OS=Mycoplasma mobile GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 66/112 (58.93%), Postives = 91/112 (81.25%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 337
            QI+GDDL+ TNPK ++KAI+ K  N++L+K+NQIG+++E+++A+ M+ +AG   + SHRSGETEDT IADL+V L TGQIKTG+  R++R+AKYN+LL IEEELG  A Y G
Sbjct:  334 QIMGDDLVTTNPKFIKKAIETKAINSVLIKLNQIGTLSETMDAIEMAHKAGMTCVVSHRSGETEDTTIADLAVALNTGQIKTGSISRTDRVAKYNRLLVIEEELGIVASYEG 445          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_METPP (Enolase OS=Methylibium petroleiphilum (strain PM1) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 65/112 (58.04%), Postives = 89/112 (79.46%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 337
            Q+VGDDL VTN K +++ I +   N++L+K+NQIG++TE+  A+ M+K+AG+  + SHRSGETED+ IAD++VG   GQIKTG+  RS+R+AKYNQLLRIEE+LG  AVY G
Sbjct:  314 QLVGDDLFVTNTKILQEGIDKGIANSILIKINQIGTLTETFAAIEMAKRAGYTAVISHRSGETEDSTIADIAVGTNAGQIKTGSLSRSDRMAKYNQLLRIEEDLGDVAVYPG 425          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_LACSS (Enolase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 337
            Q+VGDD  VTN   + K IK    N++L+KVNQIG++TES+EA+ M+K+AG+  + SHRSGETEDT IADL V    GQIKTG+  R++RLAKYNQL+RIEE+LG  A Y G
Sbjct:  311 QLVGDDFFVTNTDYLRKGIKMGAANSILVKVNQIGTLTESLEAIEMAKEAGYTAVVSHRSGETEDTTIADLVVATNAGQIKTGSMSRTDRLAKYNQLMRIEEQLGDTASYKG 422          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_FLAJ1 (Enolase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 337
            Q+VGDDL VTN  R+   I++   N++L+KVNQIG++TE+I AV M+K AG+  + SHRSGETED  IADL+V L  GQIKTG+  RS+R+AKYNQLLRIEEELG+ A + G
Sbjct:  312 QLVGDDLFVTNVARLSTGIEKGIANSILVKVNQIGTLTETIAAVNMAKNAGYTSVMSHRSGETEDNTIADLAVALNCGQIKTGSASRSDRMAKYNQLLRIEEELGSTAYFPG 423          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_BUCAT (Enolase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAE 322
            Q+VGDDL VTN   ++K IK+   N++L+K+NQIG++TE++EA++ +KQA +GV+ SHRSGETED  IADLSVG ++GQIKTG+  RS+R +KYNQL+RIEE LG +
Sbjct:  314 QLVGDDLFVTNKNILKKGIKKGIANSILIKLNQIGTLTETLEAIKTAKQANYGVIISHRSGETEDASIADLSVGTSSGQIKTGSMSRSDRTSKYNQLIRIEENLGTK 420          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_BUCAI (Enolase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAE 322
            Q+VGDDL VTN   ++K IK+   N++L+K+NQIG++TE++EA++ +KQA +GV+ SHRSGETED  IADLSVG ++GQIKTG+  RS+R +KYNQL+RIEE LG +
Sbjct:  314 QLVGDDLFVTNKNILKKGIKKGIANSILIKLNQIGTLTETLEAIKTAKQANYGVIISHRSGETEDASIADLSVGTSSGQIKTGSMSRSDRTSKYNQLIRIEENLGTK 420          
BLAST of CB417339 vs. ExPASy Swiss-Prot
Match: ENO_BUCA5 (Enolase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=eno PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.309e-31
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 2
Query:    2 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAE 322
            Q+VGDDL VTN   ++K IK+   N++L+K+NQIG++TE++EA++ +KQA +GV+ SHRSGETED  IADLSVG ++GQIKTG+  RS+R +KYNQL+RIEE LG +
Sbjct:  314 QLVGDDLFVTNKNILKKGIKKGIANSILIKLNQIGTLTETLEAIKTAKQANYGVIISHRSGETEDASIADLSVGTSSGQIKTGSMSRSDRTSKYNQLIRIEENLGTK 420          
The following BLAST results are available for this feature:
BLAST of CB417339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RHOS11.309e-3162.50Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]
ENO_PHOLL1.309e-3157.89Enolase OS=Photorhabdus luminescens subsp. laumond... [more]
ENO_PECCP1.309e-3157.89Enolase OS=Pectobacterium carotovorum subsp. carot... [more]
ENO_MYCMO1.309e-3158.93Enolase OS=Mycoplasma mobile GN=eno PE=3 SV=1[more]
ENO_METPP1.309e-3158.04Enolase OS=Methylibium petroleiphilum (strain PM1)... [more]
ENO_LACSS1.309e-3159.82Enolase OS=Lactobacillus sakei subsp. sakei (strai... [more]
ENO_FLAJ11.309e-3160.71Enolase OS=Flavobacterium johnsoniae (strain ATCC ... [more]
ENO_BUCAT1.309e-3159.81Enolase OS=Buchnera aphidicola subsp. Acyrthosipho... [more]
ENO_BUCAI1.309e-3159.81Enolase OS=Buchnera aphidicola subsp. Acyrthosipho... [more]
ENO_BUCA51.309e-3159.81Enolase OS=Buchnera aphidicola subsp. Acyrthosipho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0417 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P089 similar to enolase (acc# P42896), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417339 ID=CB417339; Name=CB417339; organism=Citrus sinensis; type=EST; length=416bp
ACAAATTGTTGGAGATGATCTTTTGGTCACCAATCCTAAGAGGGTTGAGA
AGGCTATCAAAGAGAAGACCTGCAACGCCCTCCTTCTCAAGGTTAATCAA
ATTGGATCTGTAACTGAGAGCATTGAAGCCGTCAGAATGTCCAAGCAAGC
TGGGTGGGGTGTGATGGCCAGCCACCGCAGTGGTGAGACTGAAGATACTT
TCATTGCCGATCTCTCAGTGGGCTTGGCCACGGGTCAAATTAAGACAGGA
GCACCATGCAGGTCAGAGCGCCTTGCAAAGTATAATCAGCTTCTGAGAAT
TGAAGAAGAGCTCGGTGCTGAAGCAGTTTATGCTGGTGCCAAGTTCCGTG
CCCCTGTTGAACCCTACTAGAGTTTGAGATGCTGATCTGGTGTGGTGCTG
GATTTGAGCAATGGAG
back to top