CB417342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.810e-12 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 3 VFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 239 VF D+PG+K ++KV++EDD+VL IS + R+ER G F RKF LPEN ++ + A ++GVLTVTV Sbjct: 58 VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTV 136
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 3 VFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 239 V +VD+PGLK DIK++VE++ VL +S + R+ER GKF R+F LP+N +++++ A ++GVLT+T+ Sbjct: 87 VIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTL 165
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.348e-11 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 3 VFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 239 V D+PG+K ++KV+VED VL IS + R+ER GKF+R+F LPENA ++ + A+ ++GVLTV V Sbjct: 57 VLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVV 135
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.373e-11 Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 VFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVD 242 V ++D+PGLK +IKV+VE++ VL +S + R+ER GKF R+F LP+N +++++ A ++GVLT+T+D Sbjct: 79 VIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLD 158
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.373e-11 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 3 VFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 239 VF D+PGLK ++K++++D VL IS + R+ER GK +R+F LPENA V+ + A ++GVLTVTV Sbjct: 58 VFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTV 136
BLAST of CB417342 vs. ExPASy Swiss-Prot
Match: HS186_ORYSJ (18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.6 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.741e-11 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 3 Query: 6 FIVDMPGLKSGDIKVQVEDDNVLLI-------SXXXXXXXXXXXAKYVRMERRVGK--FMRKFVLPENANVEAISAVCQDGVLTVTV 239 F++D+PGL DI+V +E+D VL++ + KY+R+ERR F RKF LPE+A+ ISA C++GVLTVTV Sbjct: 68 FVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNGKRKREEEEGECKYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTV 154 The following BLAST results are available for this feature:
BLAST of CB417342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417342 ID=CB417342; Name=CB417342; organism=Citrus sinensis; type=EST; length=394bpback to top |