CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 91/187 (48.66%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DKEK  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  + S D  LIGQFGVGFYS ++VA  V V ++   H  ++  +WES+ +G+F +   T      RGTEI LHLRD+  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVETIT---KATRGTEITLHLRDDEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_HAHCH (Chaperone protein htpG OS=Hahella chejuensis (strain KCTC 2396) GN=htpG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 92/183 (50.27%), Postives = 129/183 (70.49%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKH---NDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQAEV +L+ ++I+SLY NK+IFLREL+SNASDALDK+RF +L+ KE L EGDN  L+++++ D + + +++ D GIGM++++++ NLGTIAKSGT+ F+  +      D  LIGQFGVGFYS ++VAD VEV ++      D+   WES  +G F+I   T  E   RGT I LHL+DE  E
Sbjct:   12 FQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDALDKLRFQALS-KEDLYEGDN-DLKVRLEFDDKAQTITLSDNGIGMSRDEVVTNLGTIAKSGTAEFLSTLTGDQKQDSRLIGQFGVGFYSAFIVADKVEVYTRRAGLKPDEAVHWESSGEGDFSIETVTKEE---RGTRIVLHLKDEEKE 189          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_CITK8 (Chaperone protein htpG OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=htpG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 91/183 (49.73%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GM ++D+I +LGTIAKSGT +F+E M    + D  LIGQFGVGFYS ++VAD V V ++   DK      WES  +G + +++ T ++   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTIADNGVGMNRDDVIDHLGTIAKSGTKSFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGDKPENGVFWESAGEGEYTVADITKDD---RGTEITLHLREGEDE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.850e-40
Identity = 89/180 (49.44%), Postives = 129/180 (71.67%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVIS-KHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLR 613
            EK +F AEV ++++++I+SLY NK+IF+RELISNASDA DK+R+LS ++ E++    N K  I +K+DK+ + + IRD GIGM KEDLI+NLGTIA+SGT+ F++ +   +  D  LIGQFGVGFYS ++VAD V V S K  ++K Y WES   G + +++    +   RGTEI L+++
Sbjct:    4 EKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFK--IIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGENKVYTWESDGLGEYIVADS--EQEFARGTEIVLYIK 179          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.850e-40
Identity = 88/187 (47.06%), Postives = 130/187 (69.52%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            EK  FQ EV +L+ ++I+SLY NK+IFLREL+SNASDA DK+RF +L+D  +   GD++ L +++ +DK+ + ++I D G+GMT++D++ NLGTIAKSGT+ F  ++    + D  LIGQFGVGFYS ++VAD V V ++   DK      W S+ +G F I++    +   RGT+I LHL+D+A E
Sbjct:    8 EKHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFKALSDNSLY--GDDSDLHVRVSVDKDSRTITISDNGVGMTRDDVMNNLGTIAKSGTAEFFGQLSGDEAKDSKLIGQFGVGFYSAFIVADEVTVRTRSALDKDARGVEWRSQGEGDFEIAD---IDKARRGTDIILHLKDDADE 189          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_HELPJ (Chaperone protein htpG OS=Helicobacter pylori J99 GN=htpG PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.850e-40
Identity = 92/182 (50.55%), Postives = 125/182 (68.68%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ-YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            +++ FQ E+++L+D++I+SLY NK+IFLRELISNASDALDK+ +L LTD+++  +G NT   I +  D +KK L+I+D GIGM K DLI++LGTIAKSGT +F+  +      D  LIGQFGVGFYS ++VA  + V +K     Q Y W S   G F ISE    E   +GTEI L L++E
Sbjct:    4 QEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKL--KGLNTTPSIHLSFDSQKKTLTIKDNGIGMDKSDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVTSHQAYAWVSDGKGKFEISECVKEE---QGTEITLFLKEE 180          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.416e-40
Identity = 94/183 (51.37%), Postives = 128/183 (69.95%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L+  E L EGD  +L +++  DKEK+ L++ D GIGM++E++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++VAD V V ++      D    WES  +G + I++ T  +   RGTEI LHLR+   E
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSHPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMSREEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADAGVFWESAGEGDYTIADITKED---RGTEITLHLREGEDE 188          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.416e-40
Identity = 95/193 (49.22%), Postives = 131/193 (67.88%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVL-GEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            +  N E   FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L+  E+  G+GD   L+++I  D EK  L+I D GIGMT+E +I +LGTIAKSGT  F+  +  + + D  LIGQFGVGFYS ++VAD V V ++      DK  +WES  +G +++++    E   RGTEI LHLR+E  E
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSAPELYEGDGD---LKVRISFDAEKGTLTISDNGIGMTREQVIDHLGTIAKSGTKEFLAALGQEQAKDSQLIGQFGVGFYSAFIVADKVTVKTRAAGEPIDKAVLWESAGEGEYSVADIEKKE---RGTEITLHLREEEKE 187          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.416e-40
Identity = 94/185 (50.81%), Postives = 125/185 (67.57%), Query Frame = 2
Query:   86 KFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ-YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRD-EAGE 628
            K +FQ EV +L+ ++ +SLY NK+IF+REL+SNASDA+DK+ +L LTD+ +  +    K EI I  D++ K LSI D GIGM + DLI ++GTIAKSGT +FVE +      D NLIGQFGVGFYSV++VAD V+VISK   ++Q Y W S   G F ++  T       GT I + L+D EAGE
Sbjct:    3 KHQFQTEVGQLLHLMTHSLYSNKEIFIRELVSNASDAIDKLNYLRLTDENLKDKYAQWKGEINISFDEKDKSLSIIDNGIGMNEADLIASIGTIAKSGTKSFVEALTGDAKKDSNLIGQFGVGFYSVFMVADKVDVISKKAGEEQAYKWSSTGTGEFDLTPCTKE---SNGTVIYIKLKDEEAGE 184          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.121e-40
Identity = 90/183 (49.18%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF SL++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_SHEON1.416e-4048.66Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_HAHCH1.416e-4050.27Chaperone protein htpG OS=Hahella chejuensis (stra... [more]
HTPG_CITK81.416e-4049.73Chaperone protein htpG OS=Citrobacter koseri (stra... [more]
HTPG_RICTY1.850e-4049.44Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_IDILO1.850e-4047.06Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]
HTPG_HELPJ1.850e-4050.55Chaperone protein htpG OS=Helicobacter pylori J99 ... [more]
HTPG_YERE82.416e-4051.37Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_HAES12.416e-4049.22Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_ARCB42.416e-4050.81Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_SHIDS4.121e-4049.18Chaperone protein htpG OS=Shigella dysenteriae ser... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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