CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRD 616
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L+  + L EGD  +L +++  DK+ + L+I D GIGM +E++I +LGTIAKSGT AF+E M    + D  LIGQFGVGFYS ++VAD V V ++   DK      WES  +G + +++ T      RGTEI LHLR+
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPD-LYEGDG-ELRVRVSFDKDNRTLTIADNGIGMNREEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGDKPENGVFWESAGEGEYTVADIT---KADRGTEITLHLRE 182
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
[Close]
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 2 
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ---YVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GMT++++I +LGTIAKSGT +F+E +    + D  LIGQFGVGFYS ++VAD V V ++   +K      WES  +G + +++ T  +   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED---RGTEITLHLREGEDE 186
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_SHIFL9.181e-4048.63Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS9.181e-4048.63Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_KLEP79.181e-4050.84Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_ECOUT9.181e-4048.63Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLI9.181e-4048.63Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC9.181e-4048.63Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL69.181e-4048.63Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL59.181e-4048.63Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK19.181e-4048.63Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS9.181e-4048.63Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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